RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 UNC13DQ70J99 1090 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 TRIM69Q86WT6 500 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 CARNMT1Q8N4J0 409 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC4A11Q8NBS3 891 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 TMEM145Q8NBT3 493 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 IFI44Q8TCB0 444 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 MAPK15Q8TD08 544 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 RPL10LQ96L21 214 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 CCNL2Q96S94 520 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 KDM4CQ9H3R0 1056 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 KLHL11Q9NVR0 708 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 NLGN3Q9NZ94 848 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 SARDHQ9UL12 918 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 DMTF1Q9Y222 760 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 PCDHGA8Q9Y5G5 932 aa9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 MORC2Q9Y6X9 1032 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-217ENST00000560521 ARHGEF17Q96PE2 2063 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 LRP4O75096 1905 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 SDK2Q58EX2 2172 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 CASC3O15234 703 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 IRAK2O43187 625 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 RNGTTO60942 597 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 NEBLO76041 1014 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 IGLV3-27P01718 113 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 GP1BBP13224 206 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 VAV1P15498 845 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 STK19P49842 368 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 DUSP3P51452 185 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 RAD23BP54727 409 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 RPS24P62847 133 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 ECT2LQ008S8 904 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 AMPD3Q01432 767 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 CNTN1Q12860 1018 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 SETMARQ53H47 684 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 AGBL4Q5VU57 503 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 ARHGAP17Q68EM7 881 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 XKR5Q6UX68 686 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 CLEC14AQ86T13 490 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC9A9Q8IVB4 645 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 APCDD1Q8J025 514 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 ZNF557Q8N988 423 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 ANKRD52Q8NB46 1076 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 HJURPQ8NCD3 748 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 TMC2Q8TDI7 906 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 RNF139Q8WU17 664 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 TMEM174Q8WUU8 243 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 EXTL1Q92935 676 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 AZIN2Q96A70 460 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 PRICKLE1Q96MT3 831 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 USP28Q96RU2 1077 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 BLZF1Q9H2G9 400 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 ABCC13Q9NSE7 274 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 NBASA2RRP1 2371 aa9.25□□□□□ -0.93
RABGGTA-217ENST00000560521 VPS37CA5D8V6 355 aaPredicted RBP9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 K7ESM1 405 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SCAMP1O15126 338 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC31A1O15431 190 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC7A4O43246 635 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 NOBOXO60393 691 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 TNFSF15O95150 251 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ALPPL2P10696 532 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 NUMBP49757 651 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 TAS2R38P59533 333 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ADIGQ0VDE8 80 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SRSF6Q13247 344 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ELAVL3Q14576 367 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 RABEP1Q15276 862 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 KMT5BQ4FZB7 885 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ZNF542PQ5EBM4 170 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 UNC45BQ8IWX7 931 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SLC22A18ASQ8N1D0 253 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ARL14Q8N4G2 192 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 KLK6Q92876 244 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 TATDN2Q93075 761 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ARRDC3Q96B67 414 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 DHX58Q96C10 678 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 NOX5Q96PH1 765 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 MYOCQ99972 504 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 SEMA3CQ99985 751 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 NIF3L1Q9GZT8 377 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 CUEDC2Q9H467 287 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 USP29Q9HBJ7 922 aa9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 ATXN7L1Q9ULK2 861 aaPredicted RBP9.24□□□□□ -0.93
RABGGTA-217ENST00000560521 UTP20O75691 2785 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 CPED1A4D0V7 1026 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 NEMP2A6NFY4 417 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 XPO1O14980 1071 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 GABBR2O75899 941 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 LUC7L3O95232 432 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 MOCS3O95396 460 aa9.23□□□□□ -0.93
RABGGTA-217ENST00000560521 ITGB2P05107 769 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms