RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 KLF16Q9BXK1 252 aaPredicted RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
CRTC3-209ENST00000560320 ADAM7Q9H2U9 754 aa10.9□□□□□ -0.66
CRTC3-209ENST00000560320 ZNF334Q9HCZ1 680 aaPredicted RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 SAYSD1Q9NPB0 183 aa10.9□□□□□ -0.66
CRTC3-209ENST00000560320 TMEM248Q9NWD8 314 aa10.9□□□□□ -0.66
CRTC3-209ENST00000560320 GOLGA6AQ9NYA3 693 aa10.9□□□□□ -0.66
CRTC3-209ENST00000560320 KLHL8Q9P2G9 620 aaPredicted RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 XPO7Q9UIA9 1087 aaKnown RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 LSM7Q9UK45 103 aaKnown RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
CRTC3-209ENST00000560320 NYNRINQ9P2P1 1898 aaKnown RBP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 USP34Q70CQ2 3546 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 TRAV19A0A0A6YYK7 116 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 HIDE1A8MVS5 230 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 GRXCR1A8MXD5 290 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CCL16O15467 120 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 IVLP07476 585 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 HNRNPA1P09651 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 MYL4P12829 197 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 MYOGP15173 224 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 PTPN2P17706 415 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 HDCP19113 662 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CCNCP24863 283 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 DDX6P26196 483 aaKnown RBP eCLIP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 HOXA9P31269 272 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CHKAP35790 457 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 MAPKAPK2P49137 400 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 KCNQ1P51787 676 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CLCN4P51793 760 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 ERVK-21P61565 698 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CDK16Q00536 496 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 PARP6Q2NL67 630 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 DNAJC21Q5F1R6 531 aaKnown RBP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 FBXL22Q6P050 247 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 PID1Q7Z2X4 250 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 C14orf80Q86SX3 495 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 IQCKQ8N0W5 287 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 NPWQ8N729 165 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 NAT8LQ8N9F0 302 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 LEMD2Q8NC56 503 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 CELF6Q96J87 481 aaKnown RBP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 TSGA13Q96PP4 275 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 TXLNGYQ9BZA5 131 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 LMAN2LQ9H0V9 348 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 ATXN3LQ9H3M9 355 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 ETNK1Q9HBU6 452 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 MPP6Q9NZW5 540 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 THEGQ9P2T0 379 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 ZNF510Q9Y2H8 683 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
CRTC3-209ENST00000560320 MIA3Q5JRA6 1907 aa10.89□□□□□ -0.67
CRTC3-209ENST00000560320 IGLV3-10A0A075B6K4 115 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 C2orf78A6NCI8 922 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 DRGXA6NNA5 263 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 H3BNC9 293 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 GRM6O15303 877 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 RIPK2O43353 540 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 CLASP2O75122 1294 aaKnown RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 STC2O76061 302 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 CKMP06732 381 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 APRTP07741 180 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 VAV1P15498 845 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 TPSB2P20231 275 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 DNAJB1P25685 340 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 PHBP35232 272 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 MAGEA4P43358 317 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 YBEYP58557 167 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 SMAD3P84022 425 aaKnown RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 PDIA2Q13087 525 aaKnown RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 TPSAB1Q15661 275 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 CEP85LQ5SZL2 805 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 TTC39BQ5VTQ0 682 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 RELL1Q8IUW5 271 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 CCDC117Q8IWD4 279 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 UMODL1-AS1Q8N2C9 162 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 MCUQ8NE86 351 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 PPP2R3CQ969Q6 453 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 CDC42EP4Q9H3Q1 356 aaKnown RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 SP110Q9HB58 689 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 IL21Q9HBE4 155 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 MAN1C1Q9NR34 630 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 DNAJC17Q9NVM6 304 aaKnown RBP10.88□□□□□ -0.67
CRTC3-209ENST00000560320 RSPH14Q9UHP6 348 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 SH3BP1Q9Y3L3 701 aa10.88□□□□□ -0.67
CRTC3-209ENST00000560320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.87□□□□□ -0.67
CRTC3-209ENST00000560320 ERI2A8K979 691 aaKnown RBP10.87□□□□□ -0.67
CRTC3-209ENST00000560320 KCNK1O00180 336 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 ZNF197O14709 1029 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 MATN3O15232 486 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 RAMP2O60895 175 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 CLDN11O75508 207 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 TTC4O95801 387 aa10.87□□□□□ -0.67
CRTC3-209ENST00000560320 NUDT17P0C025 328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms