RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CNTN5O94779 1100 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 OXTRP30559 389 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SDC4P31431 198 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 DPP6P42658 865 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 PTGER3P43115 390 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 CTSOP43234 321 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TPMTP51580 245 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 HDAC4P56524 1084 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF177Q13360 481 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 C15orf59Q2T9L4 293 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 RAB6CQ53S08 254 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 ALFQ53S48 1182 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 C9orf64Q5T6V5 341 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 PLEKHA7Q6IQ23 1121 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 CIR1Q86X95 450 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SYT12Q8IV01 421 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 FRS2Q8WU20 508 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 PRCCQ92733 491 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 NTAN1Q96AB6 310 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 RAB6CQ9H0N0 254 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 RSPH9Q9H1X1 276 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TMEM74BQ9NUR3 256 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 TAS2R14Q9NYV8 317 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-213ENST00000560175 SLCO3A1Q9UIG8 710 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 CYP8B1Q9UNU6 501 aa13.6□□□□□ -0.23
SMAD3-213ENST00000560175 FAM170AA1A519 330 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 E9PAM4 449 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 GOLGA6L19H0YKK7 550 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ATP9BO43861 1147 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 GJB6O95452 261 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 CD6P30203 668 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 GGCXP38435 758 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ST8SIA6P61647 398 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 RPS14P62263 151 aaKnown RBP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 RPL7AP62424 266 aaKnown RBP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ATP11AP98196 1134 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 CREB5Q02930 508 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 SCAPQ12770 1279 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 SF3A2Q15428 464 aaKnown RBP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ASIC2Q16515 512 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 RSPO4Q2I0M5 234 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-213ENST00000560175 LRRC31Q6UY01 552 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 PHLDB2Q86SQ0 1253 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 FAM131BQ86XD5 332 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ZNF366Q8N895 744 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 NETO1Q8TDF5 533 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 DNASE2BQ8WZ79 361 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 PTPRN2Q92932 1015 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 FAM129BQ96TA1 746 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 SELENOOQ9BVL4 669 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 PCED1AQ9H1Q7 454 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 CAPN11Q9UMQ6 739 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 SNX10Q9Y5X0 201 aa13.59□□□□□ -0.23
SMAD3-213ENST00000560175 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 CXorf51AA0A1B0GTR3 108 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 SLC30A4O14863 429 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 GDF9O60383 454 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 SIN3BO75182 1162 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 RTN2O75298 545 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 GPD1P21695 349 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 RRM1P23921 792 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 DHPSP49366 369 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-213ENST00000560175 RPL6Q02878 288 aaKnown RBP13.58□□□□□ -0.24
SMAD3-213ENST00000560175 ZNF33AQ06730 810 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 CCDC6Q16204 474 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 SLC23A3Q6PIS1 610 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 KIAA1324Q6UXG2 1013 aaKnown RBP13.58□□□□□ -0.24
SMAD3-213ENST00000560175 ZNF783Q6ZMS7 281 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 TOE1Q96GM8 510 aaKnown RBP13.58□□□□□ -0.24
SMAD3-213ENST00000560175 PSMB7Q99436 277 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 CNPY3Q9BT09 278 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 MTG2Q9H4K7 406 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 OR12D3Q9UGF7 316 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 NEU3Q9UQ49 428 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 HS3ST2Q9Y278 367 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
SMAD3-213ENST00000560175 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
SMAD3-213ENST00000560175 ILVBLA1L0T0 632 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 METTL12A8MUP2 240 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms