RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 C5orf22Q49AR2 442 aa13□□□□□ -0.33
USP3-213ENST00000559711 LRRC8BQ6P9F7 803 aa13□□□□□ -0.33
USP3-213ENST00000559711 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
USP3-213ENST00000559711 KLHDC8BQ8IXV7 354 aa13□□□□□ -0.33
USP3-213ENST00000559711 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
USP3-213ENST00000559711 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
USP3-213ENST00000559711 PSMG2Q969U7 264 aa13□□□□□ -0.33
USP3-213ENST00000559711 AZIN2Q96A70 460 aa13□□□□□ -0.33
USP3-213ENST00000559711 CAPS2Q9BXY5 557 aa13□□□□□ -0.33
USP3-213ENST00000559711 GBA3Q9H227 469 aa13□□□□□ -0.33
USP3-213ENST00000559711 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
USP3-213ENST00000559711 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
USP3-213ENST00000559711 UXTQ9UBK9 157 aaPredicted RBP13□□□□□ -0.33
USP3-213ENST00000559711 ZNF212Q9UDV6 495 aa13□□□□□ -0.33
USP3-213ENST00000559711 SLC24A2Q9UI40 661 aa13□□□□□ -0.33
USP3-213ENST00000559711 CHMP2BQ9UQN3 213 aa13□□□□□ -0.33
USP3-213ENST00000559711 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
USP3-213ENST00000559711 ERI2A8K979 691 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 CACNG3O60359 315 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 SUN1O94901 812 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 JCHAINP01591 159 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 GSTA2P09210 222 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CNPP09543 421 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 GRIA1P42261 906 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 LMAN1P49257 510 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ATP1A2P50993 1020 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 EPHB3P54753 998 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 SKIDA1Q1XH10 827 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 RAP1GAP2Q684P5 730 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ITPRIPL1Q6GPH6 555 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 LILRA6Q6PI73 481 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ATPAF2Q8N5M1 289 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 MAML1Q92585 1016 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 FATE1Q969F0 183 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 IGSF8Q969P0 613 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 RETREG1Q9H6L5 497 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CNOT10Q9H9A5 744 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 ASB3Q9Y575 518 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ACSL4O60488 711 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CNTN5O94779 1100 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 AP2A1O95782 977 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 OAS1P00973 400 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 CCNB1P14635 433 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 TACR2P21452 398 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 IRAK1P51617 712 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 PLD1Q13393 1074 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 KLHL38Q2WGJ6 581 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ALFQ53S48 1182 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 KCTD11Q693B1 232 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 ARHGAP36Q6ZRI8 547 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CAPN12Q6ZSI9 719 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 TAOK1Q7L7X3 1001 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CNTD1Q8N815 330 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 FBF1Q8TES7 1133 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ARHGEF2Q92974 986 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 PLD4Q96BZ4 506 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 EBNA1BP2Q99848 306 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 DHRS4Q9BTZ2 278 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 CTNNAL1Q9UBT7 734 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ZC3H7BQ9UGR2 993 aaKnown RBP12.99□□□□□ -0.33
USP3-213ENST00000559711 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 SLC4A7Q9Y6M7 1214 aa12.99□□□□□ -0.33
USP3-213ENST00000559711 MYO16Q9Y6X6 1858 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 TRDMT1O14717 391 aaKnown RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 TGM5O43548 720 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 CXCL14O95715 111 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 F11P03951 625 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 BMPR1AP36894 532 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 HARS2P49590 506 aaKnown RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 GEMIN4P57678 1058 aaKnown RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 CYS1Q717R9 158 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 CHSY1Q86X52 802 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 RPRD1AQ96P16 312 aaPredicted RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 CYTH2Q99418 400 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 NACA2Q9H009 215 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 RSPH14Q9UHP6 348 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
USP3-213ENST00000559711 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
USP3-213ENST00000559711 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
USP3-213ENST00000559711 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
USP3-213ENST00000559711 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms