RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TACR2P21452 398 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 C5AR1P21730 350 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 SLC8A1P32418 973 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 PSMD8P48556 350 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 MARSP56192 900 aaKnown RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 EIF4EBP2Q13542 120 aaPredicted RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 RAP1GAP2Q684P5 730 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 DHRS13Q6UX07 377 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 SND1Q7KZF4 910 aaKnown RBP eCLIP13.53□□□□□ -0.24
TPM1-220ENST00000559556 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 ELOA2Q8IYF1 753 aaPredicted RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 APCDD1Q8J025 514 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 LGI2Q8N0V4 545 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
TPM1-220ENST00000559556 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 FAM131CQ96AQ9 280 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 POPDC2Q9HBU9 364 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 CYTH4Q9UIA0 394 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 SLCO3A1Q9UIG8 710 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 CEP83Q9Y592 693 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
TPM1-220ENST00000559556 A0A087WV48 116 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 E5RJQ4 531 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 ENC1O14682 589 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 CAPN9O14815 690 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 TRUB2O95900 331 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 GOT1P17174 413 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 ABCB4P21439 1286 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 DRD3P35462 400 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 CYP4F3Q08477 520 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 KCNH2Q12809 1159 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 ELAVL3Q14576 367 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 SHBQ15464 509 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 TTC39BQ5VTQ0 682 aaPredicted RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 RNF219Q5W0B1 726 aaPredicted RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 TMPRSS12Q86WS5 348 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 GATAD2AQ86YP4 633 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 STK40Q8N2I9 435 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 EHBP1Q8NDI1 1231 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 SAP25Q8TEE9 199 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 HNRNPLLQ8WVV9 542 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 RPL10LQ96L21 214 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 PRMT1Q99873 361 aaKnown RBP13.52□□□□□ -0.25
TPM1-220ENST00000559556 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 AASDHPPTQ9NRN7 309 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 TJP2Q9UDY2 1190 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 BOD1L1Q8NFC6 3051 aa13.52□□□□□ -0.25
TPM1-220ENST00000559556 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 A0A1B0GVM2 712 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 KCNU1A8MYU2 1149 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 F5H5T6 163 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 WNT9AO14904 365 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 C1SP09871 688 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 CDK4P11802 303 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 KRT5P13647 590 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 BMP6P22004 513 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 EPHA8P29322 1005 aaPredicted RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 PLK1P53350 603 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 PPP2CBP62714 309 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 YWHAZP63104 245 aaKnown RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 PPP2CAP67775 309 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 PITX1P78337 314 aaPredicted RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 SULT2A1Q06520 285 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 KLHL10Q6JEL2 608 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 DENND1BQ6P3S1 775 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 TMEM110Q86TL2 294 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 ATP6V0D2Q8N8Y2 350 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 FRS2Q8WU20 508 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 SERAC1Q96JX3 654 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 INTS2Q9H0H0 1204 aaKnown RBP13.51□□□□□ -0.25
TPM1-220ENST00000559556 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPM1-220ENST00000559556 CTNND2Q9UQB3 1225 aa13.51□□□□□ -0.25
TPM1-220ENST00000559556 MYO18BQ8IUG5 2567 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 CBX4O00257 560 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 MED7O43513 233 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 RFPL3O75679 317 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 LDOC1O95751 146 aaPredicted RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 GNA14O95837 355 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 IL1BP01584 269 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 AFPP02771 609 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms