RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 KDM1BQ8NB78 822 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 GANCQ8TET4 914 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 MYO19Q96H55 970 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 MRGPRX3Q96LB0 322 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 TMPRSS4Q9NRS4 437 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 TMEM74BQ9NUR3 256 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 ADAM22Q9P0K1 906 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 EVLQ9UI08 416 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-214ENST00000559433 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 SNX10Q9Y5X0 201 aa12.97□□□□□ -0.33
LRRC28-214ENST00000559433 A0A1B0GTH6 734 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 MED19A0JLT2 244 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 MEI4A8MW99 385 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 I6L893 689 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SIN3BO75182 1162 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 CLDN11O75508 207 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 GJB6O95452 261 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SERPINC1P01008 464 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 IGLV3-19P01714 112 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 DNTTP04053 509 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 CALB1P05937 261 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 MZF1P28698 734 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SDC4P31431 198 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 MAPK8P45983 427 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 STK19P49842 368 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 CDH4P55283 916 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 RPS14P62263 151 aaKnown RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 TPM4P67936 248 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 PTP4A2Q12974 167 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 CDO1Q16878 200 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 C5orf22Q49AR2 442 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 PEAR1Q5VY43 1037 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 ZNF776Q68DI1 518 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 LRRC31Q6UY01 552 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 BNIPLQ7Z465 357 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 FAM131BQ86XD5 332 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 PHF13Q86YI8 300 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 RXFP2Q8WXD0 754 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 RPL10LQ96L21 214 aaKnown RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SELENOOQ9BVL4 669 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 GTPBP2Q9BX10 602 aaKnown RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 GPR174Q9BXC1 333 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 CBX8Q9HC52 389 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SUSD2Q9UGT4 822 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 NCKAP1Q9Y2A7 1128 aa12.96□□□□□ -0.33
LRRC28-214ENST00000559433 ITIH6Q6UXX5 1313 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 PCDH15Q96QU1 1955 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 EDDM13A0A1B0GTR0 161 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 A0A1W2PQC6 194 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 LRRC53A6NM62 1247 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 CNTN5O94779 1100 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 SYPP08247 313 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 PYGBP11216 843 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 KRT3P12035 628 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 PLK1P53350 603 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 GSCP56915 257 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ZBTB16Q05516 673 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ASIC2Q16515 512 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 TTC31Q49AM3 519 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ACBD5Q5T8D3 534 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 LUZP1Q86V48 1076 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF683Q8IZ20 524 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 HDDC3Q8N4P3 179 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 JOSD2Q8TAC2 188 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 BAP1Q92560 729 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 C1orf74Q96LT6 269 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 NAP1L5Q96NT1 182 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 RSPH9Q9H1X1 276 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-214ENST00000559433 SLCO3A1Q9UIG8 710 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 VPS28Q9UK41 221 aa12.95□□□□□ -0.34
LRRC28-214ENST00000559433 C2CD4BA6NLJ0 364 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 E9PAM4 449 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 SRGAP2O75044 1071 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 RHOCP08134 193 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 SERPINF2P08697 491 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 PTPN9P43378 593 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 ALFQ53S48 1182 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 C9orf64Q5T6V5 341 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 DNAJC24Q6P3W2 148 aa12.94□□□□□ -0.34
LRRC28-214ENST00000559433 SLC23A3Q6PIS1 610 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms