RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CFAP52Q8N1V2 620 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 CCDC185Q8N715 623 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 DDI1Q8WTU0 396 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 IGSF8Q969P0 613 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 SIK2Q9H0K1 926 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 POLR3BQ9NW08 1133 aaPredicted RBP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 TFR2Q9UP52 801 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 REXO2Q9Y3B8 237 aaKnown RBP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.15
LINC01220-201ENST00000558575 GON4LQ3T8J9 2241 aa16.02■□□□□ 0.15
LINC01220-201ENST00000558575 EIF3CLB5ME19 914 aaKnown RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 K7EQS6 105 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 CAPNS1P04632 268 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 PSMA2P25787 234 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 EIF2DP41214 584 aaKnown RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 MAGEA1P43355 309 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 C5orf22Q49AR2 442 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 PDZD3Q86UT5 571 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 CHSY1Q86X52 802 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 CPNE8Q86YQ8 564 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 LMLNQ96KR4 655 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 C1orf74Q96LT6 269 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 BBC3Q96PG8 261 aaPredicted RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 HAPLN3Q96S86 360 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 PNKPQ96T60 521 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 EIF3CQ99613 913 aaKnown RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 BAG1Q99933 345 aaPredicted RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 IRX2Q9BZI1 471 aaPredicted RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 DNAJC17Q9NVM6 304 aaKnown RBP16.01■□□□□ 0.15
LINC01220-201ENST00000558575 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 DEC1Q9P2X7 70 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 HCN2Q9UL51 889 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 MSRB2Q9Y3D2 182 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 GPSM3Q9Y4H4 160 aa16.01■□□□□ 0.15
LINC01220-201ENST00000558575 CELSR3Q9NYQ7 3312 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
LINC01220-201ENST00000558575 RCCD1A6NED2 376 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 DRGXA6NNA5 263 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 FAM72CH0Y354 149 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 CDX4O14627 284 aaPredicted RBP16■□□□□ 0.15
LINC01220-201ENST00000558575 TBL1XO60907 577 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 NDUFA10O95299 355 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 CYBBP04839 570 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 TCF4P15884 667 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 CREB5Q02930 508 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 MPP7Q5T2T1 576 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 SCYL2Q6P3W7 929 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 CYP4V2Q6ZWL3 525 aaPredicted RBP16■□□□□ 0.15
LINC01220-201ENST00000558575 FAM72BQ86X60 149 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 SYNPOQ8N3V7 929 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 DEFB124Q8NES8 71 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 SLC35G2Q8TBE7 412 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 CTNNBL1Q8WYA6 563 aaPredicted RBP16■□□□□ 0.15
LINC01220-201ENST00000558575 NTAN1Q96AB6 310 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 XPO6Q96QU8 1125 aaKnown RBP16■□□□□ 0.15
LINC01220-201ENST00000558575 PEBP4Q96S96 227 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 OSGEPQ9NPF4 335 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 STIM2Q9P246 746 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 INTUQ9ULD6 942 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 VANGL2Q9ULK5 521 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 PCDHA13Q9Y5I0 950 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 PTPRBP23467 1997 aa16■□□□□ 0.15
LINC01220-201ENST00000558575 PRRT4C9JH25 899 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 DCLK1O15075 740 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 LRCH4O75427 683 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 KAT7O95251 611 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 DRD1P21728 446 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 MIPP30301 263 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 CYLC1P35663 651 aaPredicted RBP15.99■□□□□ 0.15
LINC01220-201ENST00000558575 GRIA2P42262 883 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 KDSRQ06136 332 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 SCAPQ12770 1279 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 GRSF1Q12849 480 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC01220-201ENST00000558575 MTA1Q13330 715 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 TCEAL1Q15170 157 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 FSCBQ5H9T9 825 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 C10orf76Q5T2E6 689 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 EMC10Q5UCC4 262 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 CIR1Q86X95 450 aaPredicted RBP15.99■□□□□ 0.15
LINC01220-201ENST00000558575 PROSER1Q86XN7 944 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 PYROXD2Q8N2H3 581 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 HJURPQ8NCD3 748 aaPredicted RBP15.99■□□□□ 0.15
LINC01220-201ENST00000558575 ZNF564Q8TBZ8 553 aaPredicted RBP15.99■□□□□ 0.15
LINC01220-201ENST00000558575 OSBPL2Q9H1P3 480 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 CTTNBP2NLQ9P2B4 639 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 UVRAGQ9P2Y5 699 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 ANAPC7Q9UJX3 599 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 FZD10Q9ULW2 581 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 SLC27A6Q9Y2P4 619 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 PAXBP1Q9Y5B6 917 aa15.99■□□□□ 0.15
LINC01220-201ENST00000558575 CFAP46Q8IYW2 2715 aa15.98■□□□□ 0.15
LINC01220-201ENST00000558575 IGLV3-10A0A075B6K4 115 aa15.98■□□□□ 0.15
LINC01220-201ENST00000558575 F5H5T6 163 aa15.98■□□□□ 0.15
LINC01220-201ENST00000558575 MTA2O94776 668 aa15.98■□□□□ 0.15
LINC01220-201ENST00000558575 CNTN5O94779 1100 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms