RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 RTP4Q96DX8 246 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.04
VPS18-202ENST00000558474 MYADMQ96S97 322 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 SPHK2Q9NRA0 654 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 DOCK8Q8NF50 2099 aa15.27■□□□□ 0.03
VPS18-202ENST00000558474 TARSL2A2RTX5 802 aaKnown RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 H7C0C1 242 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 MBTPS2O43462 519 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 RAMP2O60895 175 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 NFATC1O95644 943 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 PENKP01210 267 aaPredicted RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 TUBBP07437 444 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 PTGIRP43119 386 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 ATP5OP48047 213 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 IFNAR2P48551 515 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 RPS24P62847 133 aaKnown RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 POLD3Q15054 466 aaPredicted RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 FYB2Q5VWT5 728 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 DARS2Q6PI48 645 aaKnown RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 Q7L0L9 218 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 PLCD3Q8N3E9 789 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 ALLCQ8N6M5 410 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 RIN3Q8TB24 985 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 DDI1Q8WTU0 396 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 ATP2A3Q93084 1043 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 NXPE3Q969Y0 559 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 MYEOVQ96EZ4 313 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 VAT1Q99536 393 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 SLC2A11Q9BYW1 496 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 RAB17Q9H0T7 212 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 DUS2Q9NX74 493 aaKnown RBP15.26■□□□□ 0.03
VPS18-202ENST00000558474 AMACRQ9UHK6 382 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 CDH22Q9UJ99 828 aa15.26■□□□□ 0.03
VPS18-202ENST00000558474 CDH23Q9H251 3354 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 H0Y626 953 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 NDC80O14777 642 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 CTIFO43310 598 aaKnown RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 TSPAN3O60637 253 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 HOXD9P28356 352 aaPredicted RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 VIPR2P41587 438 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 IRAK1P51617 712 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 SNX1Q13596 522 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 EML3Q32P44 896 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 LEXMQ3ZCV2 418 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 TMCO4Q5TGY1 634 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 HEATR6Q6AI08 1181 aaKnown RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 TANGO2Q6ICL3 276 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 TFAP2DQ7Z6R9 452 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 CFAP52Q8N1V2 620 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 ATPAF2Q8N5M1 289 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 CCDC89Q8N998 374 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 FIBINQ8TAL6 211 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 RSAD2Q8WXG1 361 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 CCDC114Q96M63 670 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 LRRC3BQ96PB8 259 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 FAM83CQ9BQN1 747 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 LRRC1Q9BTT6 524 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 SLC39A8Q9C0K1 460 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 NOL6Q9H6R4 1146 aaKnown RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 FAM50BQ9Y247 325 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 UTP11Q9Y3A2 253 aaKnown RBP15.25■□□□□ 0.03
VPS18-202ENST00000558474 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
VPS18-202ENST00000558474 GRXCR2A6NFK2 248 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 RASA4BC9J798 803 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 ANHXE9PGG2 379 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 TRDMT1O14717 391 aaKnown RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 CHADO15335 359 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 HOXC11O43248 304 aaPredicted RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 RASA4O43374 803 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 RAD51CO43502 376 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 STK10O94804 968 aaKnown RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 ADH1CP00326 375 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 RHOCP08134 193 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 PSMC3P17980 439 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 KCNA5P22460 613 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 MCM3P25205 808 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 ACTN2P35609 894 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 KCNJ1P48048 391 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 SGSHP51688 502 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 DRG2P55039 364 aaKnown RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 GNA12Q03113 381 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 GAD2Q05329 585 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 SERINC3Q13530 473 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 CDH18Q13634 790 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 PTK6Q13882 451 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 SKIV2LQ15477 1246 aaKnown RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 ANO4Q32M45 955 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 P3H1Q32P28 736 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 VITQ6UXI7 678 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 GSTA5Q7RTV2 222 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 JAMLQ86YT9 394 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 MFN1Q8IWA4 741 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 CCDC13Q8IYE1 715 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms