RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 DYNC1LI2O43237 492 aaPredicted RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PAPSS1O43252 624 aaPredicted RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 KDM1AO60341 852 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 APRTP07741 180 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 C7P10643 843 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 CD247P20963 164 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PAX3P23760 479 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 HNRNPFP52597 415 aaKnown RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 KCNQ4P56696 695 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 UBXN2AP68543 259 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PMS2P3Q13401 168 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 LSM12Q3MHD2 195 aaKnown RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 MTX3Q5HYI7 312 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 INTS11Q5TA45 600 aaKnown RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 ZNF534Q76KX8 674 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PTCD2Q8WV60 388 aaKnown RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PBXIP1Q96AQ6 731 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 YTHDF1Q9BYJ9 559 aaKnown RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 NACA2Q9H009 215 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 PARVBQ9HBI1 364 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 ZBTB26Q9HCK0 441 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 RBAKQ9NYW8 714 aaPredicted RBP11.45□□□□□ -0.58
PCAT29-201ENST00000558411 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
PCAT29-201ENST00000558411 DYTNA2CJ06 578 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 SLCO1B7G3V0H7 640 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 TMX2-CTNND1H3BSU7 103 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 HDAC3O15379 428 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 TRUB2O95900 331 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CCNA2P20248 432 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 PCYT1AP49585 367 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ITGADQ13349 1161 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 FAM117BQ6P1L5 589 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 NPNTQ6UXI9 565 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 HERC6Q8IVU3 1022 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 UNC5BQ8IZJ1 945 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 PNPT1Q8TCS8 783 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ISL2Q96A47 359 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 SLCO4A1Q96BD0 722 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CIB1Q99828 191 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 KIFC3Q9BVG8 833 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CDCA7Q9BWT1 371 aaPredicted RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ILKAPQ9H0C8 392 aaPredicted RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ADAMTS10Q9H324 1103 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CD320Q9NPF0 282 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 MRGBPQ9NV56 204 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 VTI1BQ9UEU0 232 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ERVK-11Q9UQG0 969 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 MRPL11Q9Y3B7 192 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CORINQ9Y5Q5 1042 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 SNX13Q9Y5W8 968 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CPQQ9Y646 472 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 H0YCG3 227 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 J3QRK9 145 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ENTPD3O75355 529 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CLPXO76031 633 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ITGB5P18084 799 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 TGM2P21980 687 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 MAGEA12P43365 314 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 KCNJ8Q15842 424 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 XKR9Q5GH70 373 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 AGAP7PQ5VUJ5 663 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 SEL1L3Q68CR1 1132 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 LMBRD2Q68DH5 695 aaPredicted RBP11.44□□□□□ -0.58
PCAT29-201ENST00000558411 HMBOX1Q6NT76 420 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 GPAT2Q6NUI2 795 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 TMEM26Q6ZUK4 368 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CHSY3Q70JA7 882 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 IGFN1Q86VF2 1251 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CAMK1DQ8IU85 385 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CPNE9Q8IYJ1 553 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 KIAA0319LQ8IZA0 1049 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 RNF148Q8N7C7 305 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 FBXL8Q96CD0 374 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 FAM84AQ96KN4 292 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 ZNF347Q96SE7 839 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 TCF12Q99081 682 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 KLHL3Q9UH77 587 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 SERPINA10Q9UK55 444 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 RAP2CQ9Y3L5 183 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 CROCCQ5TZA2 2017 aa11.44□□□□□ -0.58
PCAT29-201ENST00000558411 STX16-NPEPL1H3BU86 382 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CSPG5O95196 566 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 BCL10O95999 233 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 CD1EP15812 388 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 MIPP30301 263 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
PCAT29-201ENST00000558411 PRKAA2P54646 552 aa11.43□□□□□ -0.58
PCAT29-201ENST00000558411 PSMC1P62191 440 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms