RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 SORBS2O94875 1100 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 C22orf31O95567 290 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 F2P00734 622 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 MYL3P08590 195 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 WEE2P0C1S8 567 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 COX4I1P13073 169 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 GCNT1Q02742 428 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 FLOT2Q14254 428 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CYTH1Q15438 398 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 KRT80Q6KB66 452 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 RDH13Q8NBN7 331 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 TBC1D15Q8TC07 691 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 HSPH1Q92598 858 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 ACCSQ96QU6 501 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 C10orf88Q9H8K7 445 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 IFT122Q9HBG6 1241 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 SEPT3Q9UH03 358 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 RNF11Q9Y3C5 154 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 COL1A2P08123 1366 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 hCG_1818297A0A087WSY0 165 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 TISP43B9A030 160 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 FAM47E-STBD1D6RA91 191 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 SPTLC1O15269 473 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 SEPT4O43236 478 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 XPOTO43592 962 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 IFNB1P01574 187 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 HMGCRP04035 888 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PABPC1P11940 636 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 ZNF26P17031 533 aaPredicted RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 CCT8P50990 548 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CLCN3P51790 818 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CAPSQ13938 189 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 DCAF6Q58WW2 860 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CES4AQ5XG92 561 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PLEKHA7Q6IQ23 1121 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 NANOGP8Q6NSW7 305 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 SPOCD1Q6ZMY3 1216 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 FRMD7Q6ZUT3 714 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CLVS1Q8IUQ0 354 aaPredicted RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 GSDMBQ8TAX9 411 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 CNDP2Q96KP4 475 aaKnown RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 NSMCE3Q96MG7 304 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
USP3-206ENST00000558157 HEMK1Q9Y5R4 338 aaPredicted RBP11.13□□□□□ -0.63
USP3-206ENST00000558157 EVPLQ92817 2033 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 CENPFP49454 3210 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 MYOCOSA0A1B0GUC4 107 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 PFDN6O15212 129 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 SLC22A2O15244 555 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 GAS2O43903 313 aaKnown RBP11.12□□□□□ -0.63
USP3-206ENST00000558157 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP3-206ENST00000558157 RFPL1O75677 317 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 KRT1P04264 644 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TFPTP0C1Z6 253 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
USP3-206ENST00000558157 GRK2P25098 689 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 DCKP27707 260 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 NAMPTP43490 491 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 NDST2P52849 883 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 ENPEPQ07075 957 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 MAMLD1Q13495 774 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 GRIK4Q16099 956 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 IER5Q5VY09 327 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 KAZNQ674X7 775 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TAS1R3Q7RTX0 852 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 EXOC8Q8IYI6 725 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 PDPRQ8NCN5 879 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TNIP2Q8NFZ5 429 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 SREK1Q8WXA9 508 aaKnown RBP11.12□□□□□ -0.63
USP3-206ENST00000558157 ARPC5LQ9BPX5 153 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
USP3-206ENST00000558157 TMEM121Q9BTD3 319 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 ANKRD60Q9BZ19 345 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 OLAHQ9NV23 265 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 NCKIPSDQ9NZQ3 722 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 XPO7Q9UIA9 1087 aaKnown RBP11.12□□□□□ -0.63
USP3-206ENST00000558157 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
USP3-206ENST00000558157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
USP3-206ENST00000558157 UGT1A9O60656 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms