RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 A0A096LPK6 155 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GOLGA8QA0A0J9YX86 632 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GOLGA8OA6NCC3 632 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GOLGA8NF8WBI6 632 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 FAM58BPP0C7Q3 252 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 HK2P52789 917 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 KYAT1Q16773 422 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 PIGGQ5H8A4 983 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 SLC26A9Q7LBE3 791 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 TICAM1Q8IUC6 712 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ALDH16A1Q8IZ83 802 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 P2RY11Q96G91 374 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 NFKBIZQ9BYH8 718 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 LRRC40Q9H9A6 602 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 COPS7BQ9H9Q2 264 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 PRDM16Q9HAZ2 1276 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 SEPT10Q9P0V9 454 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 APPL1Q9UKG1 709 aa12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 GNEQ9Y223 722 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-211ENST00000557658 MATN2O00339 956 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 HDAC3O15379 428 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 MFSD11O43934 449 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 GABBR2O75899 941 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 USP46P62068 366 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 MYBPC1Q00872 1141 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 FAM187BQ17R55 369 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 SEL1L3Q68CR1 1132 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CLEC14AQ86T13 490 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 ZNF669Q96BR6 464 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PRPF18Q99633 342 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 WDR55Q9H6Y2 383 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 NMRAL1Q9HBL8 299 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 RCOR3Q9P2K3 495 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 THEGQ9P2T0 379 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 RAP2CQ9Y3L5 183 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 USP3Q9Y6I4 520 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CITO14578 2027 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 NEMP1O14524 444 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CFLARO15519 480 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CYP2C8P10632 490 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 ME2P23368 584 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 ADSLP30566 484 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 GLUD2P49448 558 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PDK1Q15118 436 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 ADRM1Q16186 407 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 MYLK3Q32MK0 819 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 LSM12Q3MHD2 195 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PGAM4Q8N0Y7 254 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CPSF7Q8N684 471 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 BHLHE22Q8NFJ8 381 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 ZFP28Q8NHY6 868 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 KBTBD7Q8WVZ9 684 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 RCN3Q96D15 328 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 FCRL3Q96P31 734 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 CEP41Q9BYV8 373 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 GALNT8Q9NY28 637 aa12.07□□□□□ -0.48
VIPAS39-211ENST00000557658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 HNRNPRO43390 633 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 APOA4P06727 396 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ENO3P13929 434 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 MPSTP25325 297 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 INHBCP55103 352 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 IRF9Q00978 393 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 HERC3Q15034 1050 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 USP41Q3LFD5 358 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 KLC3Q6P597 504 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 IYDQ6PHW0 289 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 ISLR2Q6UXK2 745 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CCNYQ8ND76 341 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 URGCPQ8TCY9 931 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 LZICQ8WZA0 190 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CPB2Q96IY4 423 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 DNAJC1Q96KC8 554 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 MRPL45Q9BRJ2 306 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 SUDS3Q9H7L9 328 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 OXSMQ9NWU1 459 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PADI4Q9UM07 663 aa12.06□□□□□ -0.48
VIPAS39-211ENST00000557658 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms