RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 OSBPL2Q9H1P3 480 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 IGLV3-10A0A075B6K4 115 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 DRGXA6NNA5 263 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 I6L893 689 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 CCP110O43303 1012 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 EPHX1P07099 455 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 SRPRAP08240 638 aaKnown RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 GABRG2P18507 467 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 GGCXP38435 758 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 CSKP41240 450 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 AIF1P55008 147 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 HDAC4P56524 1084 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 RNF219Q5W0B1 726 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 FNIP1Q8TF40 1166 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 ZYG11BQ9C0D3 744 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 TMEM245Q9H330 911 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 ARHGAP20Q9P2F6 1191 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 GMEB2Q9UKD1 530 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 INTS6Q9UL03 887 aaKnown RBP12.86□□□□□ -0.35
SLIRP-211ENST00000557623 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 RAD54BQ9Y620 910 aa12.86□□□□□ -0.35
SLIRP-211ENST00000557623 CHD5Q8TDI0 1954 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 A0A087X0T9 212 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 GPR37O15354 613 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SRGAP2O75044 1071 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF217O75362 1048 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 RNF8O76064 485 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 FAM228BP0C875 321 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 PRKCHP24723 683 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 PSMA2P25787 234 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 NNMTP40261 264 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ECT2LQ008S8 904 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SCAPQ12770 1279 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 PTPRNQ16849 979 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 EFHC2Q5JST6 749 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 CXorf57Q6NSI4 855 aaKnown RBP12.85□□□□□ -0.35
SLIRP-211ENST00000557623 KIAA1211LQ6NV74 962 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SCYL2Q6P3W7 929 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
SLIRP-211ENST00000557623 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 TMC6Q7Z403 805 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-211ENST00000557623 CNGA4Q8IV77 575 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 RUBCNQ92622 972 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ZC3H10Q96K80 434 aaKnown RBP12.85□□□□□ -0.35
SLIRP-211ENST00000557623 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 ERVW-1Q9UQF0 538 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 SNX10Q9Y5X0 201 aa12.85□□□□□ -0.35
SLIRP-211ENST00000557623 NUP205Q92621 2012 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 TMEM191CA6NGB0 347 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 MFAP3LO75121 409 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 CNTN5O94779 1100 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 RHOCP08134 193 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-211ENST00000557623 OR1E1P30953 314 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
SLIRP-211ENST00000557623 P2RY2P41231 377 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 IRAK1P51617 712 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 KRT83P78385 493 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 CAMK2GQ13555 558 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-211ENST00000557623 ACAP1Q15027 740 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 ELF2Q15723 593 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 ALFQ53S48 1182 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF783Q6ZMS7 281 aa12.84□□□□□ -0.35
SLIRP-211ENST00000557623 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms