RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RARS2Q5T160 578 aaKnown RBP14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 TTC39BQ5VTQ0 682 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 C4orf22Q6V702 233 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 CHST9Q7L1S5 443 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 CCDC13Q8IYE1 715 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 CFAP52Q8N1V2 620 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 ATPAF2Q8N5M1 289 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 FBXO25Q8TCJ0 367 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 SH3RF2Q8TEC5 729 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 DEPDC1BQ8WUY9 529 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 ING5Q8WYH8 240 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 CAVIN3Q969G5 261 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 P2RY11Q96G91 374 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 FERMT1Q9BQL6 677 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 NOL6Q9H6R4 1146 aaKnown RBP14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
ARHGEF40-208ENST00000557498 TMEM265A0A087WTH1 108 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 A0A0A0MRY4 1105 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 E2F8A0AVK6 867 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 RNF103O00237 685 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 TRDMT1O14717 391 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 SCAMP3O14828 347 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 LINC01565O15544 149 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 GCATO75600 419 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 TCF3P15923 654 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 SGSHP51688 502 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 PLTPP55058 493 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 RPS24P62847 133 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 USP4Q13107 963 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 HIBCHQ6NVY1 386 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 ANKRD54Q6NXT1 300 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 RHBDF2Q6PJF5 856 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 GPR149Q86SP6 731 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 LRRC49Q8IUZ0 686 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 CPXM2Q8N436 756 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 HJURPQ8NCD3 748 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 ITFG1Q8TB96 612 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 CCDC110Q8TBZ0 833 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 USP13Q92995 863 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 SPATA13Q96N96 652 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 TSGA13Q96PP4 275 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 FMO2Q99518 471 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 ADAM7Q9H2U9 754 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 LMCD1Q9NZU5 365 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 MTRF1LQ9UGC7 380 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 ANAPC5Q9UJX4 755 aa14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 TPX2Q9ULW0 747 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-208ENST00000557498 A0A1B0GVM2 712 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TCAF2A6NFQ2 919 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 ARHGAP42A6NI28 874 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 RASA4BC9J798 803 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TP73O15350 636 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 RASA4O43374 803 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TSPAN3O60637 253 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 RAMP2O60895 175 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 CLDN11O75508 207 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 PRAMEF12O95522 483 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 FAM153BP0C7A2 387 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 FSHRP23945 695 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 CCNCP24863 283 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 OR1E1P30953 314 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 YBEYP58557 167 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 WASHC5Q12768 1159 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 ZNF77Q15935 545 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 PARP15Q460N3 678 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 FAM153CQ494X1 144 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 RNASEH2BQ5TBB1 312 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TIGD7Q6NT04 549 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 BBS7Q8IWZ6 715 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TTC16Q8NEE8 873 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 HMCESQ96FZ2 354 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 ZSWIM3Q96MP5 696 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 TDP1Q9NUW8 608 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 SEPT10Q9P0V9 454 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 FAM153AQ9UHL3 310 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 SHOC2Q9UQ13 582 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 CCL26Q9Y258 94 aa14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF40-208ENST00000557498 SHROOM3Q8TF72 1996 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 TYW5A2RUC4 315 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 KCNK1O00180 336 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 MAFKO60675 156 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 OPHN1O60890 802 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 TBL1XO60907 577 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 PTPN3P26045 913 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 WEE1P30291 646 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 CHKAP35790 457 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 TNNT3P45378 269 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 BASP1P80723 227 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 ADAM15Q13444 863 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 MORF4L2Q15014 288 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 POLD3Q15054 466 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 ANKRD20A2Q5SQ80 823 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 ANKRD20A1Q5TYW2 823 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 ANKRD20A3Q5VUR7 823 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 SYCE2Q6PIF2 218 aa14.82□□□□□ -0.04
ARHGEF40-208ENST00000557498 POTEHQ6S545 545 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms