RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 UNC93AQ86WB7 457 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 DENND1CQ8IV53 801 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 LILRB2Q8N423 598 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 TMEM151AQ8N4L1 468 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PARD3BQ8TEW8 1205 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 TMEM245Q9H330 911 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PNPLA8Q9NP80 782 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 KBTBD4Q9NVX7 518 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 RASAL2Q9UJF2 1139 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF510Q9Y2H8 683 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.11□□□□□ -1.43
VPS33B-207ENST00000557470 PCDHGA1Q9Y5H4 931 aa6.11□□□□□ -1.43
VPS33B-207ENST00000557470 SPTA1P02549 2419 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 TMEM229AB2RXF0 380 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ENC1O14682 589 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 VILLO15195 856 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 RRP8O43159 456 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 PAPSS1O43252 624 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 TIMM44O43615 452 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 DFNA5O60443 496 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ASS1P00966 412 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CYBBP04839 570 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 IGHV4-34P06331 123 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 RALAP11233 206 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 P4HA1P13674 534 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 MX2P20592 715 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 HOXD9P28356 352 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CASP1P29466 404 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 HLA-FP30511 346 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ACADVLP49748 655 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 AP3M2P53677 418 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 C21orf59P57076 290 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 RPS14P62263 151 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SNRPFP62306 86 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 DLG4P78352 724 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 COG7P83436 770 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 TLE3Q04726 772 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 TARDBPQ13148 414 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SLC39A14Q15043 492 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 E2F5Q15329 346 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SHBQ15464 509 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SGSM1Q2NKQ1 1148 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 HES3Q5TGS1 186 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CNNM4Q6P4Q7 775 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 FBXL19Q6PCT2 694 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 GPR155Q7Z3F1 870 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ADIPOR2Q86V24 386 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 C12orf56Q8IXR9 622 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 FAM217AQ8IXS0 508 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ZC3H3Q8IXZ2 948 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 RAVER1Q8IY67 606 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CPXM2Q8N436 756 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF276Q8N554 614 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 DDI1Q8WTU0 396 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CYFIP2Q96F07 1278 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CNDP2Q96KP4 475 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SLC6A18Q96N87 628 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 USP28Q96RU2 1077 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CDK5RAP1Q96SZ6 601 aaKnown RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 ACE2Q9BYF1 805 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SLC2A11Q9BYW1 496 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 DCLK3Q9C098 648 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 LRRC27Q9C0I9 530 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 NRSN2Q9GZP1 204 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 PRSS16Q9NQE7 514 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 CLIC5Q9NZA1 410 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 MARCH2Q9P0N8 246 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 SERTAD1Q9UHV2 236 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 FBXO9Q9UK97 447 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 PLA2G4CQ9UP65 541 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 EFR3BQ9Y2G0 817 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 USP3Q9Y6I4 520 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 RPS6KL1Q9Y6S9 549 aa6.1□□□□□ -1.43
VPS33B-207ENST00000557470 MORC2Q9Y6X9 1032 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 COL5A1P20908 1838 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-207ENST00000557470 MYH10P35580 1976 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 A0A1W2PPC4 97 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SLC12A8A0AV02 714 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 FAM47DPA6NHR8 397 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 J3QKU1 62 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 IFRD1O00458 451 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 EIF1AYO14602 144 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CAPN9O14815 690 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 TSPAN6O43657 245 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 STX6O43752 255 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 BRINP1O60477 761 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 KIF20AO95235 890 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 LDOC1O95751 146 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 DNTTP04053 509 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 WNT1P04628 370 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms