RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 HEXIM2Q96MH2 286 aaKnown RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 NOX5Q96PH1 765 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 FIZ1Q96SL8 496 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 PLIN2Q99541 437 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 DCLK3Q9C098 648 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 PDE11AQ9HCR9 933 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 FZD3Q9NPG1 666 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 PRDM8Q9NQV8 689 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 KCND2Q9NZV8 630 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 ERRFI1Q9UJM3 462 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 VWA3AA6NCI4 1184 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 EFCAB7A8K855 629 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 SLC31A1O15431 190 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 HNRNPRO43390 633 aaKnown RBP9.77□□□□□ -0.85
NEDD1-211ENST00000557454 PLRG1O43660 514 aaKnown RBP9.77□□□□□ -0.85
NEDD1-211ENST00000557454 DUX1O43812 170 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 TACC1O75410 805 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 CNTN5O94779 1100 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 FAM13AO94988 1023 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 ADH1BP00325 375 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 PRKAR1AP10644 381 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 POLR2EP19388 210 aaKnown RBP9.77□□□□□ -0.85
NEDD1-211ENST00000557454 C5AR1P21730 350 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 CD70P32970 193 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 ST8SIA6P61647 398 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 TTC38Q5R3I4 469 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 DYMQ7RTS9 669 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 TIPARPQ7Z3E1 657 aaKnown RBP9.77□□□□□ -0.85
NEDD1-211ENST00000557454 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
NEDD1-211ENST00000557454 FAM217AQ8IXS0 508 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 SLC34A3Q8N130 599 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 C4orf32Q8N8J7 132 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 KLK6Q92876 244 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 SMOQ99835 787 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 RAB34Q9BZG1 259 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 PARVGQ9HBI0 331 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 ODF2LQ9ULJ1 636 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 SCML2Q9UQR0 700 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 DAAM1Q9Y4D1 1078 aa9.77□□□□□ -0.85
NEDD1-211ENST00000557454 GOLGA8IPA6NC78 632 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 GOLGA8JA6NMD2 632 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 ZNF891A8MT65 544 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 TTC34A8MYJ7 566 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 STMND1H3BQB6 276 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 TMX2-CTNND1H3BSU7 103 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 NKX2-8O15522 239 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 AQP9O43315 295 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 CDC45O75419 566 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 HOXB4P17483 251 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 CD82P27701 267 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 MZF1P28698 734 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 CCKBRP32239 447 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 DDIT3P35638 169 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 ZNF131P52739 623 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 MAP3K7CLP57077 242 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 CLDN2P57739 230 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 EFEMP1Q12805 493 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 MRPL49Q13405 166 aaKnown RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 FGL2Q14314 439 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 DHX8Q14562 1220 aaKnown RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 MPPE1Q53F39 396 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 OR6B2Q6IFH4 312 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 STK40Q8N2I9 435 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 NOC3LQ8WTT2 800 aaKnown RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 NKD1Q969G9 470 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 JAKMIP2Q96AA8 810 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 MRGPRX3Q96LB0 322 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 GFM1Q96RP9 751 aaKnown RBP9.76□□□□□ -0.85
NEDD1-211ENST00000557454 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 DOCK9Q9BZ29 2069 aa9.76□□□□□ -0.85
NEDD1-211ENST00000557454 PRRC2CQ9Y520 2896 aaKnown RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 RNGTTO60942 597 aaKnown RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 IL1BP01584 269 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 RPLP0P05388 317 aaKnown RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 CCDC130P13994 396 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 NME1P15531 152 aaKnown RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 RPIAP49247 311 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 SGSHP51688 502 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 COG7P83436 770 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 POSTNQ15063 836 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 ZXDCQ2QGD7 858 aaPredicted RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 DEFB109BQ30KR1 87 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 GCNT7Q6ZNI0 430 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 PTAR1Q7Z6K3 402 aaPredicted RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 SCD5Q86SK9 330 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 TADA2BQ86TJ2 420 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 GPBP1Q86WP2 473 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 MCEMP1Q8IX19 187 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms