RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 IFT88Q13099 833 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 DMP1Q13316 513 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TOB2Q14106 344 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MTF1Q14872 753 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 FILIP1LQ4L180 1135 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 BMP2KLQ5H9B9 411 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 EOGTQ5NDL2 527 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TXNDC8Q6A555 127 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 GTF2IRD2BQ6EKJ0 949 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 C16orf87Q6PH81 154 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 SLC36A4Q6YBV0 504 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 LCNL1Q6ZST4 164 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 RUFY3Q7L099 469 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TMEM150AQ86TG1 271 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 GTF2IRD2Q86UP8 949 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TRIM73Q86UV7 250 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TTC30AQ86WT1 665 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 HSCBQ8IWL3 235 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 LRRC56Q8IYG6 542 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 THEM5Q8N1Q8 247 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MINDY1Q8N5J2 469 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 CCDC33Q8N5R6 958 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 LZTR1Q8N653 840 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 PNPLA1Q8N8W4 532 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MDGA1Q8NFP4 955 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MDM1Q8TC05 714 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 SPPL2BQ8TCT7 592 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 BTN2A2Q8WVV5 523 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 RLN3Q8WXF3 142 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 WASF1Q92558 559 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 ATP2A3Q93084 1043 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 SYAP1Q96A49 352 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 DRC1Q96MC2 740 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NTPCRQ9BSD7 190 aaKnown RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 GULP1Q9UBP9 304 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TUBGCP4Q9UGJ1 667 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 ACSL6Q9UKU0 697 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 DSEQ9UL01 958 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MMP17Q9ULZ9 603 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 UBQLN1Q9UMX0 589 aaKnown RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 APOBEC2Q9Y235 224 aaKnown RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 EMC9Q9Y3B6 208 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 A0A087WV48 116 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TEX51A0A1B0GUA7 166 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 MYOCOSA0A1B0GUC4 107 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TTC26A0AVF1 554 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CLDN3O15551 220 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 AP5Z1O43299 807 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SEMA7AO75326 666 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 NFATC1O95644 943 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ITGAVP06756 1048 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CSH1P0DML2 217 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CSH2P0DML3 217 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ODC1P11926 461 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 HARSP12081 509 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 HMGA1P17096 107 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 NMT1P30419 496 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 RWDD2BP57060 319 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SESN3P58005 492 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ERVFRD-1P60508 538 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SPAG1Q07617 926 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 STRN3Q13033 797 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 STK3Q13188 491 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 RABEP1Q15276 862 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 KYAT1Q16773 422 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TTC31Q49AM3 519 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SLC39A12Q504Y0 691 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CCDC73Q6ZRK6 1079 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TOGARAM2Q6ZUX3 1019 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 GLRX5Q86SX6 157 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 METTL23Q86XA0 190 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TRIM59Q8IWR1 403 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 IQCF2Q8IXL9 164 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 EFCAB13Q8IY85 973 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 DCP1BQ8IZD4 617 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TTC9BQ8N6N2 239 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 FRMD1Q8N878 549 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TXNDC5Q8NBS9 432 aaKnown RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 BHLHE22Q8NFJ8 381 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 OR10T2Q8NGX3 314 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ZBTB45Q96K62 511 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SENP8Q96LD8 212 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CAMK1GQ96NX5 476 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 PPP1R9BQ96SB3 815 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 CYP2S1Q96SQ9 504 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 SH3GL3Q99963 347 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 BHMT2Q9H2M3 363 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 LINC00597Q9H2U6 94 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 FAM124BQ9H5Z6 455 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-247ENST00000557311 TMEM206Q9H813 350 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 C17orf75Q9HAS0 396 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 KMT5AQ9NQR1 393 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 GJB4Q9NTQ9 266 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 ARHGAP28Q9P2N2 729 aa5.18□□□□□ -1.58
ATXN3-247ENST00000557311 UXTQ9UBK9 157 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms