RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ASB7Q9H672 318 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 RPF1Q9H9Y2 349 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 PLEKHA5Q9HAU0 1116 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TOPORSQ9NS56 1045 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 OGFRQ9NZT2 677 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CTTNBP2NLQ9P2B4 639 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 UVRAGQ9P2Y5 699 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 Q9UFV3 132 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 LCMT1Q9UIC8 334 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MAGEL2Q9UJ55 1249 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 AMFRQ9UKV5 643 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 RAB21Q9UL25 225 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CNTN6Q9UQ52 1028 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 SH3BP1Q9Y3L3 701 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PCSK5Q92824 1860 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 COL6A3P12111 3177 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MYH15Q9Y2K3 1946 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PSME4Q14997 1843 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 ECM29Q5VYK3 1845 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 VCANP13611 3396 aa4.71□□□□□ -1.65
SRP54-212ENST00000556992 PDE4DIPQ5VU43 2346 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 A0A087WZ62 844 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 SMIM35A0A1B0GVV1 85 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 TMCO5BA8MYB1 307 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 TNPO2O14787 897 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 ZNF185O15231 689 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 CA12O43570 354 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 NCK2O43639 380 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 CEP104O60308 925 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 FAM189A1O60320 539 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ERLIN2O94905 339 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 VNN1O95497 513 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 LSM8O95777 96 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 FTCDO95954 541 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ASS1P00966 412 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 RHOXF2BP0C7M4 288 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 TMEM191BP0C7N4 346 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 STAG3L1P0CL83 205 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 PNMA6AP0CW24 399 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 HARSP12081 509 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 P4HA1P13674 534 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ABCB4P21439 1286 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 IL12RB1P42701 662 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 SCNN1GP51170 649 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 CLCN3P51790 818 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 TNNC1P63316 161 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 RBP5P82980 135 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 TFAMQ00059 246 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 GPS2Q13227 327 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ADAM15Q13444 863 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 RIN1Q13671 783 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 STILQ15468 1287 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 MAP9Q49MG5 647 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 MARCH8Q5T0T0 291 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 GJC2Q5T442 439 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 TAF3Q5VWG9 929 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 MFSD14CQ5VZR4 134 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 KANK2Q63ZY3 851 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 C11orf63Q6NUN7 778 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 NFRKBQ6P4R8 1299 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 FBXO38Q6PIJ6 1188 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 CCNI2Q6ZMN8 369 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 SLC47A2Q86VL8 602 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 IFT20Q8IY31 132 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 THNSL1Q8IYQ7 743 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 UBL4BQ8N7F7 174 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 OR5B17Q8NGF7 314 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ACTRT1Q8TDG2 376 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 COG1Q8WTW3 980 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 SLC20A1Q8WUM9 679 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.71□□□□□ -1.66
SRP54-212ENST00000556992 KAT5Q92993 513 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 HES6Q96HZ4 224 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ANKRD36BP1Q96IX9 119 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 SCLT1Q96NL6 688 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ACAP3Q96P50 834 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 PCDHB18PQ96TA0 734 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 RHOXF2Q9BQY4 288 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 FDXACB1Q9BRP7 624 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 ADPGKQ9BRR6 497 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 PI4K2AQ9BTU6 479 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 KATNAL1Q9BW62 490 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ZNF518BQ9C0D4 1074 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 DNAI2Q9GZS0 605 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 THAP2Q9H0W7 228 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 WNT8AQ9H1J5 351 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 ZNF703Q9H7S9 590 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 ANKZF1Q9H8Y5 726 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 CYP3A43Q9HB55 503 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 IFT122Q9HBG6 1241 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 SPC25Q9HBM1 224 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 SMURF1Q9HCE7 757 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 MRPL47Q9HD33 250 aaKnown RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 SETD4Q9NVD3 440 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 GJD2Q9UKL4 321 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 GTF3C4Q9UKN8 822 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 KIAA1257Q9ULG3 409 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms