RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CES2O00748 559 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 TIMM44O43615 452 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 TMEM63AO94886 807 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 SLC3A2P08195 630 aaKnown RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 WEE2P0C1S8 567 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 ALADP13716 330 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 MATN1P21941 496 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PRKCHP24723 683 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PNPLA4P41247 253 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 GPD2P43304 727 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 RPL15P61313 204 aaKnown RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 RPP30P78346 268 aaKnown RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 TLE3Q04726 772 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 GALNT2Q10471 571 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 LAMB3Q13751 1172 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 DCTN1Q14203 1278 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 KRT32Q14532 448 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 DAZAP2Q15038 168 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 NFIL3Q16649 462 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 CBWD5Q5RIA9 395 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 SLC9C2Q5TAH2 1124 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 SPATA1Q5VX52 437 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 MTHFD1LQ6UB35 978 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 ZDHHC17Q8IUH5 632 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 GALNT16Q8N428 558 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PNPLA1Q8N8W4 532 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PNLDC1Q8NA58 520 aaKnown RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 LINS1Q8NG48 757 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 ADAMTS15Q8TE58 950 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 SNRNP27Q8WVK2 155 aaKnown RBP4.76□□□□□ -1.65
PRPF39-210ENST00000556718 NPIPB3Q92617 1050 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 CD180Q99467 661 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 AGXT2Q9BYV1 514 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 RMI1Q9H9A7 625 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PDE11AQ9HCR9 933 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 KRT84Q9NSB2 600 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 HSF4Q9ULV5 492 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 CYP46A1Q9Y6A2 500 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 C3orf70A6NLC5 250 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 TCERG1O14776 1098 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 FIBPO43427 364 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 SPRY2O43597 315 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 HEXIM1O94992 359 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ALDOAP04075 364 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 IL6RP08887 468 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 TMIGD3P0DMS9 266 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CHN1P15882 459 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ABCD3P28288 659 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CYP2C18P33260 490 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CYP4F2P78329 520 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CCDC15Q0P6D6 951 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CAMK1Q14012 370 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 Q4G0T1 1027 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 RUNDC3AQ59EK9 446 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 HAUS3Q68CZ6 603 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 GRHL2Q6ISB3 625 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ANKRD16Q6P6B7 361 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 NAPRTQ6XQN6 538 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 DPY19L3Q6ZPD9 716 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 PTCHD4Q6ZW05 846 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 NEK10Q6ZWH5 1172 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 FASTKD5Q7L8L6 764 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 C8orf58Q8NAV2 365 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 OR52L2PQ8NGH6 319 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 RP9Q8TA86 221 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ARRDC3Q96B67 414 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 SH3KBP1Q96B97 665 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 APOPT1Q96IL0 206 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 BARD1Q99728 777 aaKnown RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 TREX2Q9BQ50 279 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CHCHD6Q9BRQ6 235 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 TAOK3Q9H2K8 898 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 EBF3Q9H4W6 596 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 VEZTQ9HBM0 779 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 ALKBH4Q9NXW9 302 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 AMFRQ9UKV5 643 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 PCDHB2Q9Y5E7 798 aa4.75□□□□□ -1.65
PRPF39-210ENST00000556718 CYP2D7A0A087X1C5 515 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 FSD2A1L4K1 749 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 TTC34A8MYJ7 566 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 M0QYT0 321 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 AP4M1O00189 453 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 SPTLC2O15270 562 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 CA12O43570 354 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 TULP3O75386 442 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 TIPRLO75663 272 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 CYP3A4P08684 503 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 HSPA1AP0DMV8 641 aaKnown RBP4.74□□□□□ -1.65
PRPF39-210ENST00000556718 HSPA1BP0DMV9 641 aaKnown RBP4.74□□□□□ -1.65
PRPF39-210ENST00000556718 CCR9P51686 369 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 EEFSECP57772 596 aaKnown RBP4.74□□□□□ -1.65
PRPF39-210ENST00000556718 TAS2R50P59544 299 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 ARF3P61204 181 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-210ENST00000556718 DCAF7P61962 342 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 ARF1P84077 181 aaKnown RBP4.74□□□□□ -1.65
PRPF39-210ENST00000556718 E2F1Q01094 437 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 DNASE1L3Q13609 305 aa4.74□□□□□ -1.65
PRPF39-210ENST00000556718 THOC5Q13769 683 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms