RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MINDY1Q8N5J2 469 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 ZNF366Q8N895 744 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 FIBINQ8TAL6 211 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 SHC3Q92529 594 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC39A13Q96H72 371 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 FCRL2Q96LA5 508 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 CNTNAP3BQ96NU0 1288 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 PPP1R9BQ96SB3 815 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 TUBGCP2Q9BSJ2 902 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 CNTNAP3Q9BZ76 1288 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 ZDHHC5Q9C0B5 715 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 FAM204AQ9H8W3 233 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 CD93Q9NPY3 652 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 ASNSD1Q9NWL6 643 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 DDIT4Q9NX09 232 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 COX16Q9P0S2 106 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 KIAA1522Q9P206 1035 aaPredicted RBP7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 DNAJC12Q9UKB3 198 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 NCKAP1Q9Y2A7 1128 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 NFE2L3Q9Y4A8 694 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
HNRNPC-226ENST00000556628 MUC22E2RYF6 1773 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 KCNU1A8MYU2 1149 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 KCNJ18B7U540 433 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 HSF2BPO75031 334 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 LUC7L3O95232 432 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 TACR2P21452 398 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 MAOBP27338 520 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 PMLP29590 882 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CCR1P32246 355 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 PI4KAP42356 2102 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 RPS24P62847 133 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC12A1Q13621 1099 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 RAPGEF1Q13905 1077 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 HNRNPDQ14103 355 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.144e-11■□□□□ 10.6
HNRNPC-226ENST00000556628 DPCR1Q3MIW9 517 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 HSP90AA4PQ58FG1 418 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 TTC39BQ5VTQ0 682 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 DCAF12L1Q5VU92 463 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 RAP1GAP2Q684P5 730 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 C11orf57Q6ZUT1 292 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.144e-6■■□□□ 12.7
HNRNPC-226ENST00000556628 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 FAM124AQ86V42 546 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 IRF2BP1Q8IU81 584 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 DEFB106AQ8N104 65 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CFAP52Q8N1V2 620 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 KDM1BQ8NB78 822 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 TMEM35BQ8NCS4 154 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 MSANTD4Q8NCY6 345 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 C1orf131Q8NDD1 294 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 DEFB124Q8NES8 71 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 WFDC5Q8TCV5 224 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 GANCQ8TET4 914 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 SNX19Q92543 992 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 PRICKLE1Q96MT3 831 aaPredicted RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CPXM1Q96SM3 734 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 BTBD1Q9H0C5 482 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 PCED1AQ9H1Q7 454 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 TMEM245Q9H330 911 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 ACP6Q9NPH0 428 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 FSCN3Q9NQT6 498 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CYTH4Q9UIA0 394 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 SCML1Q9UN30 329 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 DMXL1Q9Y485 3027 aa7.95□□□□□ -1.14
HNRNPC-226ENST00000556628 CACNA1AO00555 2505 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 FRYLO94915 3013 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 A0A1B0GVM2 712 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TARSL2A2RTX5 802 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TCAF2A6NFQ2 919 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 UPK3BL1B0FP48 263 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 UPK3BL2E5RIL1 263 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 FOXN3O00409 490 aaPredicted RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 GIPC1O14908 333 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DAB1O75553 588 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 GRAP2O75791 330 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 IGLV3-19P01714 112 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 IGLV3-25P01717 112 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SRPRAP08240 638 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 EEF1GP26641 437 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 NOS2P35228 1153 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 CSKP41240 450 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 GSK3AP49840 483 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 RPS14P62263 151 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 ECT2LQ008S8 904 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC6A3Q01959 620 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 APBA1Q02410 837 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SULT2A1Q06520 285 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SEMA3BQ13214 749 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 NME3Q13232 169 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC14A1Q13336 389 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms