RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ALPPL2P10696 532 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 LCP1P13796 627 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 CD19P15391 556 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 DGKAP23743 735 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 NNMTP40261 264 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 TBX4P57082 545 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 BST2Q10589 180 aaKnown RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 NFATC3Q12968 1075 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 ELAVL3Q14576 367 aaKnown RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 SETMARQ53H47 684 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 SGO2Q562F6 1265 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 CDCP2Q5VXM1 449 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 INTS8Q75QN2 995 aaKnown RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 CFAP52Q8N1V2 620 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 LMLNQ96KR4 655 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 ZNF396Q96N95 335 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 IRX2Q9BZI1 471 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-219ENST00000556432 EVA1BQ9NVM1 165 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 FAM13BQ9NYF5 915 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 TSPAN16Q9UKR8 245 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 SATB2Q9UPW6 733 aa14.41□□□□□ -0.1
ACTN1-219ENST00000556432 PRAMEF26H0Y7S4 382 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 MOCS2O96007 188 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-219ENST00000556432 CKMT1AP12532 417 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 MYF5P13349 255 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 STK19P49842 368 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-219ENST00000556432 METAP1P53582 386 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 CUL4AQ13619 759 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 FSCBQ5H9T9 825 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 NADSYN1Q6IA69 706 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 FOXR1Q6PIV2 292 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 DSG4Q86SJ6 1040 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 UBA3Q8TBC4 463 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 MAPK15Q8TD08 544 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 TMEM174Q8WUU8 243 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 CCDC97Q96F63 343 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-219ENST00000556432 TMEM8AQ9HCN3 771 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 ASCL3Q9NQ33 180 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 ARHGAP20Q9P2F6 1191 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 MTMR6Q9Y217 621 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 ITIH6Q6UXX5 1313 aa14.4□□□□□ -0.1
ACTN1-219ENST00000556432 C10orf142B7Z368 130 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 K7ENP7 123 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 PIK3R2O00459 728 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 LUC7L3O95232 432 aaKnown RBP14.39□□□□□ -0.11
ACTN1-219ENST00000556432 IGLV3-27P01718 113 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 THEGLP0DJG4 465 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 VAV1P15498 845 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 PRLRP16471 622 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 NR2F2P24468 414 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 DRD3P35462 400 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 DUSP3P51452 185 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-219ENST00000556432 NUCB2P80303 420 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 MSANTD2Q6P1R3 559 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 INO80CQ6PI98 192 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-219ENST00000556432 TRIM69Q86WT6 500 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 SNRNP27Q8WVK2 155 aaKnown RBP14.39□□□□□ -0.11
ACTN1-219ENST00000556432 SEMA4DQ92854 862 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 MYEOVQ96EZ4 313 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 APOLD1Q96LR9 279 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 CALN1Q9BXU9 219 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
ACTN1-219ENST00000556432 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 CNGB3Q9NQW8 809 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 IL17BQ9UHF5 180 aa14.39□□□□□ -0.11
ACTN1-219ENST00000556432 MAPK13O15264 365 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 SLC31A1O15431 190 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 SLC7A4O43246 635 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 PLRG1O43660 514 aaKnown RBP14.38□□□□□ -0.11
ACTN1-219ENST00000556432 YEATS4O95619 227 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 GP1BAP07359 652 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 SETSIPP0DME0 302 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 ZNF18P17022 549 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 RGS7P49802 495 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 DAOAP59103 153 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 KCNMA1Q12791 1236 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 ACCSLQ4AC99 568 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 MS4A13Q5J8X5 152 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 FAM46CQ5VWP2 391 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 KRT39Q6A163 491 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 APCDD1Q8J025 514 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 LGI2Q8N0V4 545 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 FBXL13Q8NEE6 735 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 IFI44Q8TCB0 444 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 OR8D1Q8WZ84 308 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 KLK6Q92876 244 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
ACTN1-219ENST00000556432 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
ACTN1-219ENST00000556432 NEMP2A6NFY4 417 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 C1QTNF3-AMACRE9PGA6 284 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 KLRC4O43908 158 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 BNIP3LO60238 219 aa14.37□□□□□ -0.11
ACTN1-219ENST00000556432 PIAS2O75928 621 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms