RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 C10orf71Q711Q0 1435 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 TRIOBPQ9H2D6 2365 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PIK3R4Q99570 1358 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 CASP8AP2Q9UKL3 1982 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PTPN23Q9H3S7 1636 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 TTC34A8MYJ7 566 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 E7EVH7 732 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 UBE2Q2LH0YL09 131 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PRYO14603 147 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 CYP21A2P08686 494 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 HOXD12P35452 270 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PTH2RP49190 550 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 AARSP49588 968 aaKnown RBP eCLIP3.78□□□□□ -1.8
SRP54-209ENST00000555746 NHLH1Q02575 133 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 GAB1Q13480 694 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 KCNB1Q14721 858 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 ANKRD40Q6AI12 368 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 FCRLBQ6BAA4 426 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 TMEM65Q6PI78 240 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 KYAT3Q6YP21 454 aaKnown RBP3.78□□□□□ -1.8
SRP54-209ENST00000555746 RASGRP2Q7LDG7 609 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 ZNF398Q8TD17 642 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PNISRQ8TF01 805 aaKnown RBP3.78□□□□□ -1.8
SRP54-209ENST00000555746 ASB12Q8WXK4 309 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 AKAP1Q92667 903 aaKnown RBP eCLIP3.78□□□□□ -1.8
SRP54-209ENST00000555746 RILPL2Q969X0 211 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 ZNF845Q96IR2 970 aaPredicted RBP3.78□□□□□ -1.8
SRP54-209ENST00000555746 RITA1Q96K30 269 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 UBXN10Q96LJ8 280 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 CCDC17Q96LX7 622 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 HS6ST2Q96MM7 605 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PYM1Q9BRP8 204 aaKnown RBP3.78□□□□□ -1.8
SRP54-209ENST00000555746 TMPRSS5Q9H3S3 457 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 GJD2Q9UKL4 321 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 VPS4AQ9UN37 437 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 SLC12A4Q9UP95 1085 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 SIRT4Q9Y6E7 314 aaPredicted RBP3.78□□□□□ -1.8
SRP54-209ENST00000555746 SBF2Q86WG5 1849 aa3.78□□□□□ -1.8
SRP54-209ENST00000555746 PIK3C2BO00750 1634 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 SPATA31A5Q5VU36 1347 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 SPATA31A7Q8IWB4 1347 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 LRRC3CA6NJW4 275 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 GCATO75600 419 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 HEXIM1O94992 359 aaKnown RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 NHLRC4P0CG21 123 aaPredicted RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 NDUFS1P28331 727 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 SLC8A1P32418 973 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 GRK5P34947 590 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 AGTR2P50052 363 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 PAPOLAP51003 745 aaKnown RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 ZNF84P51523 738 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 TAS2R50P59544 299 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 TFF2Q03403 129 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 CNGA3Q16281 694 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 FAM110CQ1W6H9 321 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 STRIP1Q5VSL9 837 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 TMEM88Q6PEY1 159 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 SERPINA13PQ6UXR4 307 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 SLC39A5Q6ZMH5 540 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 ARHGEF25Q86VW2 580 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 CHSY1Q86X52 802 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 PRIMA1Q86XR5 153 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 PTGR2Q8N8N7 351 aaPredicted RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 BOLLQ8N9W6 283 aaKnown RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 CSGALNACT1Q8TDX6 532 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 AFG1LQ8WV93 481 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 ZSCAN31Q96LW9 406 aaPredicted RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 MRIQ9BWK5 157 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 GATA5Q9BWX5 397 aaPredicted RBP3.77□□□□□ -1.81
SRP54-209ENST00000555746 PRDM16Q9HAZ2 1276 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 ZNHIT2Q9UHR6 403 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 KCND3Q9UK17 655 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 RAB21Q9UL25 225 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 PXDNLA1KZ92 1463 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 C1orf167Q5SNV9 1468 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 NOS1P29475 1434 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 ADGRL3Q9HAR2 1447 aa3.77□□□□□ -1.81
SRP54-209ENST00000555746 PLEKHG1Q9ULL1 1385 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 NRAPQ86VF7 1730 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3DA0A087WVF3 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3IA0A087WXS9 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3EA0A087X179 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3KA0A087X1G2 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 CCDC189A1A4V9 331 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3BA6NDS4 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3FA6NER0 549 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 C16orf96A6NNT2 1141 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TISP43B9A030 160 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 TBC1D3LB9A6J9 549 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 EIF3FO00303 357 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 NCAM2O15394 837 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 HNRNPRO43390 633 aaKnown RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 KAT7O95251 611 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 SGPL1O95470 568 aa3.76□□□□□ -1.81
SRP54-209ENST00000555746 ALDOAP04075 364 aaKnown RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 CENPBP07199 599 aaPredicted RBP3.76□□□□□ -1.81
SRP54-209ENST00000555746 CNPP09543 421 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms