RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SMOC2Q9H3U7 446 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 TBC1D13Q9NVG8 400 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 VANGL2Q9ULK5 521 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 PRG3Q9Y2Y8 225 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-207ENST00000555497 A0A1W2PQH9 124 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 KLF11O14901 512 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 T-ENOLP0DO92 83 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 OTOP3Q7RTS5 596 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 RASSF3Q86WH2 238 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 USP33Q8TEY7 942 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 CDKL2Q92772 493 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 CERS2Q96G23 380 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 ZNF419Q96HQ0 510 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-207ENST00000555497 TRIM55Q9BYV6 548 aa24.84■■□□□ 1.57
TMEM260-207ENST00000555497 ZNF395Q9H8N7 513 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-207ENST00000555497 MAGED2Q9UNF1 606 aaPredicted RBP24.84■■□□□ 1.57
TMEM260-207ENST00000555497 ARHGEF37A1IGU5 675 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 ARHGAP42A6NI28 874 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 F7P08709 466 aaPredicted RBP24.83■■□□□ 1.57
TMEM260-207ENST00000555497 KRT16P08779 473 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 SPANXN3Q5MJ09 141 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 MANEALQ5VSG8 457 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.83■■□□□ 1.57
TMEM260-207ENST00000555497 HAPLN3Q96S86 360 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 TRIM62Q9BVG3 475 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 NDFIP2Q9NV92 336 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 SIRPGQ9P1W8 387 aa24.83■■□□□ 1.57
TMEM260-207ENST00000555497 VWA8A3KMH1 1905 aa24.83■■□□□ 1.56
TMEM260-207ENST00000555497 A0A0G2JND7 137 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 CCDC195A0A1B0GUA6 201 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 DFFAO00273 331 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 TPP1O14773 563 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 ZNF189O75820 626 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 OAZ2O95190 189 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 DLDP09622 509 aaKnown RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 TARSP26639 723 aaKnown RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 SKIV2L2P42285 1042 aaKnown RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 DDR2Q16832 855 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 BRMS1LQ5PSV4 323 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 MTDHQ86UE4 582 aaKnown RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 DNAAF3Q8N9W5 541 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 ZNF669Q96BR6 464 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 FCRL2Q96LA5 508 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 ZCWPW2A0A1B0GU75 182 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 GSRP00390 522 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 IL1BP01584 269 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 ITGA2BP08514 1039 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 TPH1P17752 444 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 CYP2C18P33260 490 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 BST1Q10588 318 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 PDE1CQ14123 709 aaPredicted RBP24.82■■□□□ 1.56
TMEM260-207ENST00000555497 C16orf46Q6P387 395 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 TMEM135Q86UB9 458 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 VAT1Q99536 393 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 LRRC40Q9H9A6 602 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 BFARQ9NZS9 450 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 HAO1Q9UJM8 370 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 EMCNQ9ULC0 261 aa24.82■■□□□ 1.56
TMEM260-207ENST00000555497 C2orf71A6NGG8 1288 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 TGDSO95455 350 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 GMPRP36959 345 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 NOGQ13253 232 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 CHI3L2Q15782 390 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 TAF1BQ53T94 588 aaPredicted RBP24.81■■□□□ 1.56
TMEM260-207ENST00000555497 ITPRIPL1Q6GPH6 555 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 ZFATQ9P243 1243 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 ATP9BO43861 1147 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 HOXC13P31276 330 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 CCR1P32246 355 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 GRK4P32298 578 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 IRX4P78413 519 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 NAB1Q13506 487 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 ANKRD20A4Q4UJ75 823 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 LHX8Q68G74 356 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 C14orf80Q86SX3 495 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 NUDCD3Q8IVD9 361 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 E2F7Q96AV8 911 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 MFSD3Q96ES6 412 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 TMEM237Q96Q45 408 aa24.81■■□□□ 1.56
TMEM260-207ENST00000555497 A0A1W2PQ45 241 aaPredicted RBP24.8■■□□□ 1.56
TMEM260-207ENST00000555497 A0A1W2PQY0 241 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 MOXD2PA6NHM9 499 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 ERI2A8K979 691 aaKnown RBP24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TMEM189-UBE2V1I3L0A0 370 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 BPGMP07738 259 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TTC9BQ8N6N2 239 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TSGA13Q96PP4 275 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 AGAP2Q99490 1192 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TMEM120AQ9BXJ8 343 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 SLC39A8Q9C0K1 460 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 C20orf27Q9GZN8 174 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TXLNGQ9NUQ3 528 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 CBX6O95503 412 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 MOCS2O96007 188 aaPredicted RBP24.8■■□□□ 1.56
TMEM260-207ENST00000555497 USP46P62068 366 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 TMPRSS15P98073 1019 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 SNCBQ16143 134 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 CTC1Q2NKJ3 1217 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 PPM1JQ5JR12 505 aa24.8■■□□□ 1.56
TMEM260-207ENST00000555497 SLC43A3Q8NBI5 491 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms