RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PARP15Q460N3 678 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 ANKS1BQ7Z6G8 1248 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 C12orf40Q86WS4 652 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 AHI1Q8N157 1196 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 LMLNQ96KR4 655 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 OSBPL8Q9BZF1 889 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 CLEC4EQ9ULY5 219 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 MRPS17Q9Y2R5 130 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 RAD54BQ9Y620 910 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 F5P12259 2224 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 KIF2AO00139 706 aaPredicted RBP16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 KCNK3O14649 394 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 DCXO43602 365 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 TIMM44O43615 452 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 RHOCP08134 193 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 PABPC1P11940 636 aaKnown RBP16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 DRD1P21728 446 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 SOX9P48436 509 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 STARD6P59095 220 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 FSCBQ5H9T9 825 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 SEL1L2Q5TEA6 688 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 AFMIDQ63HM1 303 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 ZNF852Q6ZMS4 543 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 TPRG1Q6ZUI0 275 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 LRRC49Q8IUZ0 686 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 PQLC3Q8N755 202 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 TERB1Q8NA31 727 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 CCDC26Q8TAB7 109 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 WFDC5Q8TCV5 224 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 FAM3CQ92520 227 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 WDR24Q96S15 920 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 NELL2Q99435 816 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 ABCB8Q9NUT2 735 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 DNAI1Q9UI46 699 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 GGA2Q9UJY4 613 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 MYOFQ9NZM1 2061 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 TTC28Q96AY4 2481 aa16.87■□□□□ 0.29
SPTLC2-203ENST00000554901 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 CES2O00748 559 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ENC1O14682 589 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 APOL1O14791 398 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TJP3O95049 919 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 APODP05090 189 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ALADP13716 330 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 PRLRP16471 622 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 SLC6A11P48066 632 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 GALK1P51570 392 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 GNA12Q03113 381 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 LMAN2Q12907 356 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TMEM196Q5HYL7 178 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 DCAF12L1Q5VU92 463 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 NCBP2-AS2Q69YL0 99 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ASTLQ6HA08 431 aaPredicted RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 BBS12Q6ZW61 710 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 BZW1Q7L1Q6 419 aaKnown RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 EDAQ92838 391 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 PBKQ96KB5 322 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 FEM1AQ9BSK4 669 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 KLC2Q9H0B6 622 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 NDFIP2Q9NV92 336 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 SNX12Q9UMY4 172 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 OR51B4Q9Y5P0 310 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 BDP1A6H8Y1 2624 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 NCAM2O15394 837 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 KAT7O95251 611 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ATP1A1P05023 1023 aaKnown RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TCP1P17987 556 aaKnown RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TGM2P21980 687 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TNFRSF4P43489 277 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 NR2C2P49116 596 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 DNA2P51530 1060 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 SULT2A1Q06520 285 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 SIGLEC14Q08ET2 396 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 GRSF1Q12849 480 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 POLD3Q15054 466 aaPredicted RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 PLEKHG6Q3KR16 790 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 RNF219Q5W0B1 726 aaPredicted RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 PAPD7Q5XG87 772 aaKnown RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 TXNDC11Q6PKC3 985 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 RFX6Q8HWS3 928 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 PLD5Q8N7P1 536 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 DCAF4L2Q8NA75 395 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ACDQ96AP0 544 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ALG14Q96F25 216 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 C2orf49Q9BVC5 232 aaPredicted RBP16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 MUC3BQ9H195 1237 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 LRRC19Q9H756 370 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 ETNK2Q9NVF9 386 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 CA14Q9ULX7 337 aa16.86■□□□□ 0.29
SPTLC2-203ENST00000554901 KRBA1A5PL33 1030 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 ARHGAP42A6NI28 874 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 SHISA7A6NL88 538 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 CST8O60676 142 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 MX2P20592 715 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 CD70P32970 193 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 CSKP41240 450 aa16.85■□□□□ 0.29
SPTLC2-203ENST00000554901 FBXO43Q4G163 708 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms