RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PTDSS1P48651 473 aaKnown RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ANKRD22Q5VYY1 191 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 FUT10Q6P4F1 479 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 SPATA31D4Q6ZUB0 917 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 FAM124BQ9H5Z6 455 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 PIGVQ9NUD9 493 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 C3orf70A6NLC5 250 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ZNF623O75123 536 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 OLIG1Q8TAK6 271 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 DQX1Q8TE96 717 aaKnown RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 MPP6Q9NZW5 540 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 PSMC3IPQ9P2W1 217 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 COPEO14579 308 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ATP6V1B1P15313 513 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 TPH1P17752 444 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 DRD4P21917 467 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 CALB2P22676 271 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 VHLP40337 213 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 PRMT2P55345 433 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 CYLC2Q14093 348 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 SNX30Q5VWJ9 437 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ANO7Q6IWH7 933 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 NKD2Q969F2 451 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 TLR8Q9NR97 1041 aaKnown RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 MRGBPQ9NV56 204 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 MARCH2Q9P0N8 246 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 KRT38O76015 456 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 PFKMP08237 780 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 GSTA2P09210 222 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 GPR15P49685 360 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 GALK1P51570 392 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 C1QTNF12Q5T7M4 302 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 RINLQ6ZS11 566 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 SCYL1Q96KG9 808 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 DRC3Q9H069 523 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 VPS11Q9H270 941 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ATXN3LQ9H3M9 355 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 ZDHHC18Q9NUE0 388 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 MFSD11O43934 449 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 CAPN15O75808 1086 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 GABRB2P47870 512 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 THOC5Q13769 683 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ZNF235Q14590 738 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TAC4Q86UU9 113 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 RBM12BQ8IXT5 1001 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ATP6V0D2Q8N8Y2 350 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 SREK1Q8WXA9 508 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ZNF669Q96BR6 464 aaPredicted RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 SERPINB12Q96P63 405 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 RRN3Q9NYV6 651 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TRIP12Q14669 1992 aaPredicted RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TAF10Q12962 218 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 GRAMD1BQ3KR37 738 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 MROH9Q5TGP6 573 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 KLHDC9Q8NEP7 349 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 GCNAQ96QF7 691 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 PCMTD2Q9NV79 361 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ETNK2Q9NVF9 386 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ARHGEF38Q9NXL2 777 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 GMIPQ9P107 970 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 ALKAL1Q6UXT8 129 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 OR10T2Q8NGX3 314 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TDRKHQ9Y2W6 561 aaKnown RBP16.94■□□□□ 0.3
PCNX1-209ENST00000554879 RLFQ13129 1914 aa16.94■□□□□ 0.3
PCNX1-209ENST00000554879 TROVE2P10155 538 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PSMB4P28070 264 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 NR2C2P49116 596 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PSMD5Q16401 504 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 HSP90AA5PQ58FG0 334 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 NPAS4Q8IUM7 802 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 LRRC43Q8N309 656 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 SCG3Q8WXD2 468 aaKnown RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 SERPINB11Q96P15 392 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ARHGEF4Q9NR80 690 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PCDH10Q9P2E7 1040 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PCDHB8Q9UN66 801 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 MFHAS1Q9Y4C4 1052 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ENPP3O14638 875 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PCYT1AP49585 367 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 GEMIN4P57678 1058 aaKnown RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 ARFGAP1Q8N6T3 406 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PDP2Q9P2J9 529 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 SLC2A3P11169 496 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 KRT4P19013 534 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 L1CAMP32004 1257 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 GARSP41250 739 aaKnown RBP16.93■□□□□ 0.3
PCNX1-209ENST00000554879 NCALDP61601 193 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 PLD1Q13393 1074 aa16.93■□□□□ 0.3
PCNX1-209ENST00000554879 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms