RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C16orf89Q6UX73 402 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 UBR7Q8N806 425 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 OR7G1Q8NGA0 311 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 APBB2Q92870 758 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 NACC2Q96BF6 587 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 MSTO1Q9BUK6 570 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 ANKRD60Q9BZ19 345 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 COQ10BQ9H8M1 238 aa16■□□□□ 0.15
SYNE3-203ENST00000554873 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
SYNE3-203ENST00000554873 RPL22P35268 128 aaKnown RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 THOP1P52888 689 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 OTUD4Q01804 1114 aaKnown RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 GNA12Q03113 381 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 TRPC3Q13507 836 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 ZNF394Q53GI3 561 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 FAAH2Q6GMR7 532 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 CPSF7Q8N684 471 aaKnown RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 MINDY2Q8NBR6 621 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 LILRB4Q8NHJ6 448 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 ALPK1Q96QP1 1244 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 NPLQ9BXD5 320 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 VPS28Q9UK41 221 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 K7ERI5 159 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 TOM1L1O75674 476 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 PARNO95453 639 aaKnown RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 CHRNB1P11230 501 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 EMC2Q15006 297 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 FSCBQ5H9T9 825 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 CYP4A22Q5TCH4 519 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 FAM83AQ86UY5 434 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 BPHLQ86WA6 291 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-203ENST00000554873 PHTF2Q8N3S3 785 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 FBXO40Q9UH90 709 aa15.99■□□□□ 0.15
SYNE3-203ENST00000554873 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 SPAG6O75602 509 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 RNASEH2AO75792 299 aaKnown RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ERBB2P04626 1255 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 EDN1P05305 212 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ACTR2P61160 394 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 LGSNQ5TDP6 509 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 SLFN12LQ6IEE8 588 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ABHD15Q6UXT9 468 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 BNC2Q6ZN30 1099 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 TTC39CQ8N584 583 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ACDQ96AP0 544 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 JPH1Q9HDC5 661 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 TMEM9Q9P0T7 183 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ANKMY1Q9P2S6 941 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 N6AMT1Q9Y5N5 214 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 LRRIQ4A6NIV6 560 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 KMOO15229 486 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 CST8O60676 142 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-203ENST00000554873 SMTNL2Q2TAL5 461 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 PIGGQ5H8A4 983 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 KCNT1Q5JUK3 1230 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 GPAT2Q6NUI2 795 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 XRRA1Q6P2D8 792 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 GALNT18Q6P9A2 607 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 MAVSQ7Z434 540 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ARFGAP1Q8N6T3 406 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 TMEM35BQ8NCS4 154 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 USP33Q8TEY7 942 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 ARID2Q68CP9 1835 aa15.98■□□□□ 0.15
SYNE3-203ENST00000554873 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 C1orf232A0A0U1RR37 186 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 DCXO43602 365 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 NOL3O60936 208 aaKnown RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 LYPLA1O75608 230 aaPredicted RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 RFPL1O75677 317 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 PIGRP01833 764 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 ELK3P41970 407 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 EIF3EP60228 445 aaKnown RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 ADAM17P78536 824 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TEDDM1Q5T9Z0 273 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TMEM26Q6ZUK4 368 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 SIX6OS1Q8N1H7 587 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 MYO1HQ8N1T3 1032 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 NIPA2Q8N8Q9 360 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 FAM47BQ8NA70 645 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 CDRT15Q96T59 188 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 MMP19Q99542 508 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 RNF146Q9NTX7 359 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 ATP11BQ9Y2G3 1177 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 GMNNO75496 209 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 BCAS2O75934 225 aaPredicted RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 MYO1DO94832 1006 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 TMEM63AO94886 807 aa15.97■□□□□ 0.15
SYNE3-203ENST00000554873 LSM8O95777 96 aaKnown RBP15.97■□□□□ 0.15
SYNE3-203ENST00000554873 IL1R2P27930 398 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms