RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TMEM196Q5HYL7 178 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TMCO3Q6UWJ1 677 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KIAA0907Q7Z7F0 614 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 UMODL1-AS1Q8N2C9 162 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TERB1Q8NA31 727 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KDM1BQ8NB78 822 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TSC1Q92574 1164 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 IGSF8Q969P0 613 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 FAF2Q96CS3 445 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 C2orf49Q9BVC5 232 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 RAB6CQ9H0N0 254 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 CARD9Q9H257 536 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 HAUS2Q9NVX0 235 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 CWC15Q9P013 229 aaKnown RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 GGA2Q9UJY4 613 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 HPCAL4Q9UM19 191 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 NEU3Q9UQ49 428 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ZKSCAN5Q9Y2L8 839 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 ZDBF2Q9HCK1 2354 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 DCHS1Q96JQ0 3298 aa8.28□□□□□ -1.08
LINC01397-201ENST00000554808 TP53BP1Q12888 1972 aaPredicted RBP8.28□□□□□ -1.08
LINC01397-201ENST00000554808 OTOL1A6NHN0 477 aaPredicted RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ARHGAP42A6NI28 874 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 FAM72CH0Y354 149 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CES2O00748 559 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 RAMP2O60895 175 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 KAT7O95251 611 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 SRPRAP08240 638 aaKnown RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 TCF4P15884 667 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ERCC2P18074 760 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 POLR2EP19388 210 aaKnown RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MX2P20592 715 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 TGM2P21980 687 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 HLA-FP30511 346 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 NNMTP40261 264 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 NR2C2P49116 596 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MRPS21P82921 87 aaKnown RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 NHLH1Q02575 133 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 SLC20A2Q08357 652 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 RPS6KA1Q15418 735 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CA9Q16790 459 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 PLEKHG6Q3KR16 790 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ANKRD20A8PQ5CZ79 823 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 FAM72AQ5TYM5 149 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 DAB2IPQ5VWQ8 1189 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 FAM72DQ6L9T8 149 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 C14orf80Q86SX3 495 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 FAM72BQ86X60 149 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CCDC50Q8IVM0 306 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 SIX5Q8N196 739 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 PYROXD2Q8N2H3 581 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 DCAF4L2Q8NA75 395 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ST13P5Q8NFI4 369 aaPredicted RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MAIP1Q8WWC4 291 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CASKIN2Q8WXE0 1202 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 BHMTQ93088 406 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CSPG4P5Q96PW8 444 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 FERMT1Q9BQL6 677 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MUC3BQ9H195 1237 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MFSD1Q9H3U5 465 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 LTB4R2Q9NPC1 389 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 GPATCH2LQ9NWQ4 482 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
LINC01397-201ENST00000554808 PLK2Q9NYY3 685 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 MPP6Q9NZW5 540 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 ZNF212Q9UDV6 495 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 SLC25A13Q9UJS0 675 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 CA14Q9ULX7 337 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 PYCARDQ9ULZ3 195 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 STARD13Q9Y3M8 1113 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
LINC01397-201ENST00000554808 RALGAPA1Q6GYQ0 2036 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 A0A0U1RQJ8 604 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 TBC1D3BA6NDS4 549 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 APOL1O14791 398 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 DCLK1O15075 740 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 ATG13O75143 517 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 CNTN5O94779 1100 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 TJP3O95049 919 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 FTCDO95954 541 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 CISD3P0C7P0 127 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 TNNT1P13805 278 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 HNRNPLP14866 589 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC01397-201ENST00000554808 TCP1P17987 556 aaKnown RBP8.26□□□□□ -1.09
LINC01397-201ENST00000554808 GGCXP38435 758 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 CDKN2BP42772 138 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 RPS9P46781 194 aaKnown RBP8.26□□□□□ -1.09
LINC01397-201ENST00000554808 PEX5P50542 639 aa8.26□□□□□ -1.09
LINC01397-201ENST00000554808 GALK1P51570 392 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms