RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 ULK4Q96C45 1275 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 DNAJC19Q96DA6 116 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 AGAP3Q96P47 875 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 DGCR6LQ9BY27 220 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 ARMC1Q9NVT9 282 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 EHD3Q9NZN3 535 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 MKLN1Q9UL63 735 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 PPLO60437 1756 aa6.54□□□□□ -1.36
PCNX1-207ENST00000554691 ARHGAP23Q9P227 1491 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 IGSF9BQ9UPX0 1349 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SPEF2Q9C093 1822 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ARPC4-TTLL3A0A0A6YYG9 625 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TCRBV5S4A2TA0A5A2 114 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 EFCAB14O75071 495 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SOAT2O75908 522 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 CYP2D6P10635 497 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ATP6V1B2P21281 511 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ACADSBP45954 432 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 JAM2P57087 298 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 GTF2IP78347 998 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 DLG1Q12959 904 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MAD2L1Q13257 205 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 VPS72Q15906 364 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PAGE2BQ5JRK9 111 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 KIAA1841Q6NSI8 718 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 KLHL17Q6TDP4 642 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MFSD7Q6UXD7 560 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 C16orf86Q6ZW13 317 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 UBR7Q8N806 425 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 GALNT6Q8NCL4 622 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 C12orf43Q96C57 262 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 RCN3Q96D15 328 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PANX3Q96QZ0 392 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 FAM118BQ9BPY3 351 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MLPHQ9BV36 600 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 KLHL31Q9H511 634 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MTMR4Q9NYA4 1195 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MAGEL2Q9UJ55 1249 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PPM1HQ9ULR3 514 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 VPS4AQ9UN37 437 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TECPR2O15040 1411 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 A0A1W2PPM1 405 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 BTN3A3O00478 584 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 CYP27B1O15528 508 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TULP3O75386 442 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ANXA9O76027 345 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 C8BP07358 591 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 COL6A2P12110 1019 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SLC16A2P36021 539 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 GRIA3P42263 894 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 CCT8P50990 548 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SP4Q02446 784 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SCN1BQ07699 218 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ITKQ08881 620 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 EIF2B5Q13144 721 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TSNQ15631 228 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 INO80DQ53TQ3 878 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 IQSEC1Q6DN90 963 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ZNF280DQ6N043 979 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 LINC00299Q6ZSB3 139 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 NOP9Q86U38 636 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 P2RY8Q86VZ1 359 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 RYBPQ8N488 228 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 RTL3Q8N8U3 475 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ITFG1Q8TB96 612 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MAGEE2Q8TD90 523 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 BORCS6Q96GS4 357 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ELMO2Q96JJ3 720 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SLITRK1Q96PX8 696 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MRPL4Q9BYD3 311 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 SEMA6AQ9H2E6 1030 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 KCTD10Q9H3F6 313 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 FAM49BQ9NUQ9 324 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TRMT6Q9UJA5 497 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 EIF3LQ9Y262 564 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 IFT52Q9Y366 437 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 GRIP1Q9Y3R0 1128 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 ZNF335Q9H4Z2 1342 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 A0A087X1B8 175 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 A0A096LPK6 155 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PDPK1O15530 556 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 UGT2B11O75310 529 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 TADA2AO75478 443 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PIGNO95427 931 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 UGT2B4P06133 528 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MLNP12872 115 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PROZP22891 400 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 HNF4AP41235 474 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
PCNX1-207ENST00000554691 PPP4CP60510 307 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 RAD51Q06609 339 aa6.53□□□□□ -1.36
PCNX1-207ENST00000554691 BMPR2Q13873 1038 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms