RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 HSFY1Q96LI6 401 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 INTS2Q9H0H0 1204 aaKnown RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 RSPH9Q9H1X1 276 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 FBRSQ9HAH7 460 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 ACP6Q9NPH0 428 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 PLCB1Q9NQ66 1216 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 TJP2Q9UDY2 1190 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 PLA2G4CQ9UP65 541 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 CNTN6Q9UQ52 1028 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 NAALADL1Q9UQQ1 740 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 LUC7L2Q9Y383 392 aaKnown RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 PCDHB9Q9Y5E1 797 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 COL5A1P20908 1838 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-215ENST00000554656 LAMA5O15230 3695 aa10.95□□□□□ -0.66
SHMT2-215ENST00000554656 KCNK3O14649 394 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 IRAK2O43187 625 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 PAPSS1O43252 624 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 CCP110O43303 1012 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 SIN3BO75182 1162 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 FBXO21O94952 628 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 FSBPO95073 299 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 MOCS2O96007 188 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 IGLV3-25P01717 112 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ATP5BP06576 529 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ATXN1LP0C7T5 689 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 POLR2EP19388 210 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 GRIA4P48058 902 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 AFF3P51826 1226 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 GCNT1Q02742 428 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 NNTQ13423 1086 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 STILQ15468 1287 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 C9orf64Q5T6V5 341 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ZNF776Q68DI1 518 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 PROSER1Q86XN7 944 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 SCUBE3Q8IX30 993 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 CFAP52Q8N1V2 620 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 NEK11Q8NG66 645 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 OR8K1Q8NGG5 319 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 SETD7Q8WTS6 366 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 DNAJC7Q99615 494 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 BAG1Q99933 345 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 PABPC3Q9H361 631 aaKnown RBP10.94□□□□□ -0.66
SHMT2-215ENST00000554656 EBF2Q9HAK2 575 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 OSGEPQ9NPF4 335 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 MYO6Q9UM54 1294 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 TLR6Q9Y2C9 796 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ANKRD6Q9Y2G4 727 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 PCDHGB2Q9Y5G2 931 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 LOC400499M0QZD8 3231 aa10.94□□□□□ -0.66
SHMT2-215ENST00000554656 ARID1BQ8NFD5 2236 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 E5RJQ4 531 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 H0Y8X5 98 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 MID1O15344 667 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 FLRT2O43155 660 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 DNTTP04053 509 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CD27P26842 260 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 KRT9P35527 623 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CTSKP43235 329 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 NUMBP49757 651 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CDK17Q00537 523 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 APBA1Q02410 837 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 ZBTB16Q05516 673 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CETN1Q12798 172 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 EIF4EBP2Q13542 120 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 EXOC3L4Q17RC7 722 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 HNRNPA1L2Q32P51 320 aaKnown RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 DCAF6Q58WW2 860 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 ZC3H12AQ5D1E8 599 aaKnown RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 PITRM1Q5JRX3 1037 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 GJB7Q6PEY0 223 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 IL27RAQ6UWB1 636 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 GBP6Q6ZN66 633 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CIR1Q86X95 450 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 TMEM139Q8IV31 216 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 APCDD1Q8J025 514 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 LGI2Q8N0V4 545 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 CARNMT1Q8N4J0 409 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 FAM149B1Q96BN6 582 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 SERPINB11Q96P15 392 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 ABHD10Q9NUJ1 306 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 SPTLC3Q9NUV7 552 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 ERVW-1Q9UQF0 538 aa10.93□□□□□ -0.66
SHMT2-215ENST00000554656 APOBEC2Q9Y235 224 aaKnown RBP10.93□□□□□ -0.66
SHMT2-215ENST00000554656 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 MYLKQ15746 1914 aa10.92□□□□□ -0.66
SHMT2-215ENST00000554656 A0A1W2PP55 124 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms