RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 NSFP46459 744 aaKnown RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 TUFMP49411 452 aaKnown RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 KIF11P52732 1056 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 BCAT1P54687 386 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 KRT83P78385 493 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 FMO1Q01740 532 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 RAB33AQ14088 237 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 PTPN14Q15678 1187 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 SLC18A3Q16572 532 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 LRIT3Q3SXY7 679 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 CCDC122Q5T0U0 273 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 C10orf76Q5T2E6 689 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 E4F1Q66K89 784 aaPredicted RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 SLC8B1Q6J4K2 584 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 ACAD10Q6JQN1 1059 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 DENND1BQ6P3S1 775 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 KIAA1328Q86T90 577 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 ERICH1Q86X53 443 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 PASD1Q8IV76 773 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 FUKQ8N0W3 1084 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 ARHGEF39Q8N4T4 335 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 MRPL43Q8N983 215 aaKnown RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 ANKRD52Q8NB46 1076 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 ZNF461Q8TAF7 563 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 UBA3Q8TBC4 463 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 SPPL2BQ8TCT7 592 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 AUTS2Q8WXX7 1259 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 DDX1Q92499 740 aaKnown RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 PCED1BQ96HM7 432 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 FUBP3Q96I24 572 aaKnown RBP eCLIP7.03□□□□□ -1.28
KTN1-213ENST00000554306 PGLYRP2Q96PD5 576 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 TMEM209Q96SK2 561 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 DUSP16Q9BY84 665 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 MIS12Q9H081 205 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 PRO3102Q9H379 93 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 SYNCQ9H7C4 482 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 CCSER2Q9H7U1 834 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 RXFP1Q9HBX9 757 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 TSPAN16Q9UKR8 245 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 MAFFQ9ULX9 164 aa7.03□□□□□ -1.28
KTN1-213ENST00000554306 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
KTN1-213ENST00000554306 COL4A4P53420 1690 aaPredicted RBP7.03□□□□□ -1.28
KTN1-213ENST00000554306 A0A087X0T9 212 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 TMCO5BA8MYB1 307 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 EIF3CLB5ME19 914 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 CLDN5O00501 218 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 DDX3XO00571 662 aaKnown RBP eCLIP7.02□□□□□ -1.29
KTN1-213ENST00000554306 PRRG1O14668 218 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 XPO1O14980 1071 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 TEX28O15482 410 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CCP110O43303 1012 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 RTN2O75298 545 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 NDUFA10O95299 355 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 FTLP02792 175 aaPredicted RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 CNPP09543 421 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 H2AFZP0C0S5 128 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 FAM228BP0C875 321 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 GLI4P10075 376 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 BDNFP23560 247 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 MAGEA11P43364 429 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 ACADSBP45954 432 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 MAP3K7CLP57077 242 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 RPL10AP62906 217 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 PRR5P85299 388 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CCZ1BP86790 482 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CCZ1P86791 482 aaPredicted RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 ROR1Q01973 937 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 ADCY1Q08828 1119 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 BST2Q10589 180 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 VMACQ2NL98 169 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 MGAT5BQ3V5L5 792 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CFAP221Q4G0U5 840 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 HS1BP3Q53T59 392 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 NAA35Q5VZE5 725 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 ALKBH5Q6P6C2 394 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 VSTM1Q6UX27 236 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 H2AFVQ71UI9 128 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 LRRTM3Q86VH5 581 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 PALB2Q86YC2 1186 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 SCN4BQ8IWT1 228 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 IPO4Q8TEX9 1081 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 KLHL5Q96PQ7 755 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 PCDHB18PQ96TA0 734 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 EIF3CQ99613 913 aaKnown RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 PKMYT1Q99640 499 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 SEPT5Q99719 369 aaPredicted RBP7.02□□□□□ -1.29
KTN1-213ENST00000554306 CLSTN3Q9BQT9 956 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 ZSWIM1Q9BR11 485 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 UBXN6Q9BZV1 441 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 TLE6Q9H808 572 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CYP4F11Q9HBI6 524 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 LRRC4Q9HBW1 653 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
KTN1-213ENST00000554306 DMAP1Q9NPF5 467 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms