RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MRPS35P82673 323 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 HTRA4P83105 476 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 LSAMPQ13449 338 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SMAD2Q15796 467 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 DGKDQ16760 1214 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 UBE2SQ16763 222 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 QRICH1Q2TAL8 776 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF568Q3ZCX4 644 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TCEAL5Q5H9L2 206 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 WASHC2DQ5SRD0 308 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SYDE2Q5VT97 1194 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 RINT1Q6NUQ1 792 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ZC3H14Q6PJT7 736 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SLC30A10Q6XR72 485 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 EP400NLQ6ZTU2 488 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 NIPA1Q7RTP0 329 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 APBB1IPQ7Z5R6 666 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 BMP8AQ7Z5Y6 402 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TDRPQ86YL5 185 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 IGDCC3Q8IVU1 814 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CCDC105Q8IYK2 499 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 LRRC34Q8IZ02 419 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 MYCT1Q8N699 235 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 PRELID2Q8N945 189 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 NETO2Q8NC67 525 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 BHLHE22Q8NFJ8 381 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 OR2W6PQ8NHA6 318 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ARHGEF2Q92974 986 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CFAP57Q96MR6 1250 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 RIT2Q99578 217 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SLC38A3Q99624 504 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CDC6Q99741 560 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 PRMT1Q99873 361 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TRIM51Q9BSJ1 452 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 DHRS4Q9BTZ2 278 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CCDC28BQ9BUN5 200 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 FRMD8P1Q9BZ68 369 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 MAF1Q9H063 256 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 LRMDAQ9H2I8 198 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 AGPAT3Q9NRZ7 376 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CLDND1Q9NY35 253 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 FRMPD2Q68DX3 1309 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ZMYM2Q9UBW7 1377 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 H0YCG3 227 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TRAFD1O14545 582 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 MEIS2O14770 477 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 PRPF4O43172 522 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TGFB1I1O43294 461 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 PSTPIP1O43586 416 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 EXOC3O60645 756 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 UNC5CO95185 931 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ZWINTO95229 277 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ARIH2O95376 493 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 FTLP02792 175 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 CLTAP09496 248 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 NEFHP12036 1026 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ATF2P15336 505 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 STX2P32856 288 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 HOXD13P35453 343 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 MSH2P43246 934 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 RPL21P46778 160 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 PEX5P50542 639 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 NCALDP61601 193 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 RPS6P62753 249 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 GPM6BQ13491 265 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SSPNQ14714 243 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 NAA25Q14CX7 972 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TRADDQ15628 312 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TCTN1Q2MV58 587 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 EPC2Q52LR7 807 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 PRR16Q569H4 304 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF618Q5T7W0 954 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 DCAF12L1Q5VU92 463 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 CCDC62Q6P9F0 684 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 RSPO2Q6UXX9 243 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TRIM72Q6ZMU5 477 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 C1orf186Q6ZWK4 172 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ASRGL1Q7L266 308 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF720Q7Z2F6 126 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 FAM228AQ86W67 206 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SYCP3Q8IZU3 236 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ARHGAP24Q8N264 748 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ATL2Q8NHH9 583 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 MZB1Q8WU39 189 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 NSMCE1Q8WV22 266 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 AFG1LQ8WV93 481 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 CLEC4DQ8WXI8 215 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 EDAQ92838 391 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 APBB2Q92870 758 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SLC5A5Q92911 643 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 CD101Q93033 1021 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TBC1D31Q96DN5 1066 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 TMEM169Q96HH4 297 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ACCSQ96QU6 501 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 YME1L1Q96TA2 773 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 HSD17B14Q9BPX1 270 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms