RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BBS7Q8IWZ6 715 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ATPAF2Q8N5M1 289 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 SMRP1Q8NCR6 262 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ZSCAN18Q8TBC5 510 aaPredicted RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 HTR3CQ8WXA8 447 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ING5Q8WYH8 240 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 FGF13Q92913 245 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 SMARCD2Q92925 531 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 WBP2Q969T9 261 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 LRRC45Q96CN5 670 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 SNF8Q96H20 258 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 MSLNLQ96KJ4 702 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ASB16Q96NS5 453 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 NECTIN4Q96NY8 510 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 PNKPQ96T60 521 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 VAT1Q99536 393 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TRIM51Q9BSJ1 452 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 PARD6BQ9BYG5 372 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 MAGEH1Q9H213 219 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 S1PR5Q9H228 398 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 USP29Q9HBJ7 922 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 EPB41L5Q9HCM4 733 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 CLDND1Q9NY35 253 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 WHRNQ9P202 907 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 PAK5Q9P286 719 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ASIC3Q9UHC3 531 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 CCL26Q9Y258 94 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TBC1D30Q9Y2I9 924 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 BRWD1Q9NSI6 2320 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 A0A0A0MRY4 1105 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 CXorf51AA0A1B0GTR3 108 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 GOLGA6L7A0A1B0GV03 622 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 C5orf60A6NFR6 353 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 RASA4BC9J798 803 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 DFFAO00273 331 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 KCNN4O15554 427 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 RASA4O43374 803 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 OPHN1O60890 802 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ERLIN1O75477 346 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 MAP3K6O95382 1288 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 IFNB1P01574 187 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 CYBBP04839 570 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ITIH2P19823 946 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 CCNCP24863 283 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 RBL1P28749 1068 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 IRAK1P51617 712 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 GDF10P55107 478 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 VSNL1P62760 191 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 RPS24P62847 133 aaKnown RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 IFI35P80217 286 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 CAV1Q03135 178 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 AP1B1Q10567 949 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 CALCOCO2Q13137 446 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ZNF177Q13360 481 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 NAA30Q147X3 362 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 ANO4Q32M45 955 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 MAP9Q49MG5 647 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 GET4Q7L5D6 327 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 CCDC117Q8IWD4 279 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 CCDC13Q8IYE1 715 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 FAM71DQ8N9W8 422 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 TDRD5Q8NAT2 981 aaKnown RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 CCNYQ8ND76 341 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 TMA16Q96EY4 203 aaKnown RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 MYEOVQ96EZ4 313 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 P2RY11Q96G91 374 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ZSWIM3Q96MP5 696 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 SPATA13Q96N96 652 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 LGMNQ99538 433 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 SMG9Q9H0W8 520 aaKnown RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 NOL6Q9H6R4 1146 aaKnown RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 NDFIP2Q9NV92 336 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ARGLU1Q9NWB6 273 aaPredicted RBP7.84□□□□□ -1.15
TDP1-209ENST00000554180 MARK1Q9P0L2 795 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 TRHDEQ9UKU6 1024 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 CDH7Q9ULB5 785 aa7.84□□□□□ -1.15
TDP1-209ENST00000554180 ESYT3A0FGR9 886 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 ZSCAN5CA6NGD5 496 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 RNF103O00237 685 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 DNALI1O14645 258 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 MATN3O15232 486 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 MAFKO60675 156 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 TBL1XO60907 577 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 SEC31AO94979 1220 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 LUC7L3O95232 432 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 PENKP01210 267 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 RHOCP08134 193 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 VAV1P15498 845 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 H2AFXP16104 143 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 IGFBP4P22692 258 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 IVDP26440 423 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 HOXD9P28356 352 aaPredicted RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 LTBRP36941 435 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 ADCY8P40145 1251 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 MAGEA6P43360 314 aa7.83□□□□□ -1.16
TDP1-209ENST00000554180 RPL21P46778 160 aaKnown RBP7.83□□□□□ -1.16
TDP1-209ENST00000554180 PAPOLAP51003 745 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms