RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CNTN5O94779 1100 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 KRT14P02533 472 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 UQCRHP07919 91 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 RHOCP08134 193 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ADCY8P40145 1251 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 GARSP41250 739 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 RPS24P62847 133 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ZXDBP98169 803 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 GALNT2Q10471 571 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 USP4Q13107 963 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 CDH18Q13634 790 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 COL19A1Q14993 1142 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 OASLQ15646 514 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF77Q15935 545 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ANO4Q32M45 955 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ALFQ53S48 1182 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM78AQ5JUQ0 283 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF783Q6ZMS7 281 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 TPGS1Q6ZTW0 290 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 OTOP3Q7RTS5 596 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 NLRP14Q86W24 1093 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM217AQ8IXS0 508 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 CARNMT1Q8N4J0 409 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ALLCQ8N6M5 410 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM71DQ8N9W8 422 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 BBOF1Q8ND07 529 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 HTR3CQ8WXA8 447 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 MARVELD3Q96A59 401 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 HDAC11Q96DB2 347 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 CELF6Q96J87 481 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 OLFM3Q96PB7 478 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 MAGEH1Q9H213 219 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 TRPV4Q9HBA0 871 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 EPB41L5Q9HCM4 733 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 FAM114A2Q9NRY5 505 aa10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 DUS2Q9NX74 493 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 MTCL1Q9Y4B5 1905 aaKnown RBP10.73□□□□□ -0.69
TMEM55B-205ENST00000554028 ZNF638Q14966 1978 aaKnown RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 ILVBLA1L0T0 632 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 RASA4BC9J798 803 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 NRG2O14511 850 aaPredicted RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 RASA4O43374 803 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MAP3K6O95382 1288 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 NFATC1O95644 943 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 FOSL2P15408 326 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 CCNCP24863 283 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 RBL1P28749 1068 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PTGIRP43119 386 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PAPOLAP51003 745 aaKnown RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 GNA12Q03113 381 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 DLX2Q07687 328 aaPredicted RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 NR1H3Q13133 447 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 CALCOCO2Q13137 446 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PTK6Q13882 451 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PDGFRLQ15198 375 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 IL31Q6EBC2 164 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MTSS1LQ765P7 747 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 CIR1Q86X95 450 aaPredicted RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MFN1Q8IWA4 741 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 CCDC13Q8IYE1 715 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 BBS5Q8N3I7 341 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 NPWQ8N729 165 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MYLIPQ8WY64 445 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 IRF7Q92985 503 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MSLNLQ96KJ4 702 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 TSGA13Q96PP4 275 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 VAT1Q99536 393 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 LGMNQ99538 433 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SPON2Q9BUD6 331 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SLC39A8Q9C0K1 460 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MUC3BQ9H195 1237 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SP110Q9HB58 689 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PCDH9Q9HC56 1237 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SPHK2Q9NRA0 654 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 SEPT10Q9P0V9 454 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 KIAA1522Q9P206 1035 aaPredicted RBP10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 PAK5Q9P286 719 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 NEU3Q9UQ49 428 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 MFHAS1Q9Y4C4 1052 aa10.72□□□□□ -0.69
TMEM55B-205ENST00000554028 C5orf60A6NFR6 353 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 HEPACAM2A8MVW5 462 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ADH1CP00326 375 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 LAMP2P13473 410 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 ITIH2P19823 946 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 LTBRP36941 435 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 VIPR2P41587 438 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 RENBPP51606 427 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 DRG2P55039 364 aaKnown RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 MRPS25P82663 173 aaKnown RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 PPIDQ08752 370 aaKnown RBP10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 GPS1Q13098 491 aa10.71□□□□□ -0.69
TMEM55B-205ENST00000554028 CUL1Q13616 776 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms