RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 GCNAQ96QF7 691 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 DHRS4Q9BTZ2 278 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 DMTF1Q9Y222 760 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 NUMBLQ9Y6R0 609 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 KBTBD13C9JR72 458 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 GOLGA8RI6L899 631 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CLDN5O00501 218 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 MDM4O15151 490 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 BEST1O76090 585 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 KRT4P19013 534 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 ACAT1P24752 427 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CYP2F1P24903 491 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 RABGGTBP53611 331 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PITX1P78337 314 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CDC42EP1Q00587 391 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 NR1H3Q13133 447 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PDSS2Q86YH6 399 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CROCCP3Q8IVE0 287 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PYROXD2Q8N2H3 581 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CENPIQ92674 756 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 USP6NLQ92738 828 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 ERLEC1Q96DZ1 483 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PTCD3Q96EY7 689 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PRR11Q96HE9 360 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TBCBQ99426 244 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 NRDE2Q9H7Z3 1164 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TMPRSS4Q9NRS4 437 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 GDAP2Q9NXN4 497 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 APPL1Q9UKG1 709 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 HEMK1Q9Y5R4 338 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TEX264Q9Y6I9 313 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 BRCA2P51587 3418 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 KANSL1LA0AUZ9 987 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 MYADML2A6NDP7 307 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 E9PBE3 544 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 F8W8V4 182 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PTGESO14684 152 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 CD4P01730 458 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TFAP2AP05549 437 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 KCNE1P15382 129 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PHBP35232 272 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PTPN9P43378 593 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 RPL34P49207 117 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 AFF1P51825 1210 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 BCAT1P54687 386 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 LILRA4P59901 499 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 SMUG1Q53HV7 270 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 SLC26A9Q7LBE3 791 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 LIMS2Q7Z4I7 341 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TTC7BQ86TV6 843 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PRPF39Q86UA1 669 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 WDR75Q8IWA0 830 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 BBS5Q8N3I7 341 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 GDPD5Q8WTR4 605 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PANX3Q96QZ0 392 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 TRIM56Q9BRZ2 755 aaKnown RBP9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 SNX25Q9H3E2 840 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 EPB41L1Q9H4G0 881 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 PLAC1Q9HBJ0 212 aa9.25□□□□□ -0.93
AL049839.2-201ENST00000553947 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 TCRBV9S1A1TA0A576 114 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 C2orf71A6NGG8 1288 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 EIF3FO00303 357 aaPredicted RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 ZBED1O96006 694 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 TGM2P21980 687 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 TAF6P49848 677 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 ARPC4P59998 168 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 YWHAZP63104 245 aaKnown RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 RASA2Q15283 850 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 DPYSL2Q16555 572 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 MYLK3Q32MK0 819 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 ANKRD20A4Q4UJ75 823 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 KIAA0319Q5VV43 1072 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 PACS1Q6VY07 963 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 NET1Q7Z628 596 aaPredicted RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 PIGZQ86VD9 579 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 CAND1Q86VP6 1230 aaKnown RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 SCAIQ8N9R8 606 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 SREK1Q8WXA9 508 aaKnown RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 RTP4Q96DX8 246 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 CLIP3Q96DZ5 547 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 PRPF18Q99633 342 aaKnown RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 HEPHQ9BQS7 1158 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 ZNF670Q9BS34 389 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 LIN28AQ9H9Z2 209 aaKnown RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 RRN3Q9NYV6 651 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 AP4E1Q9UPM8 1137 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 GPC6Q9Y625 555 aaPredicted RBP9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 AK5Q9Y6K8 562 aa9.24□□□□□ -0.93
AL049839.2-201ENST00000553947 SH3PXD2BA1X283 911 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms