RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CHRNA5P30532 468 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 ADPRHP54922 357 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
SCFD1-210ENST00000553693 WASHC2DQ5SRD0 308 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 SPATA2LQ8IUW3 424 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-210ENST00000553693 SLC25A41Q8N5S1 370 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 ELP5Q8TE02 316 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 PNRC2Q9NPJ4 139 aaKnown RBP4.42□□□□□ -1.7
SCFD1-210ENST00000553693 NCKIPSDQ9NZQ3 722 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 IGSF9Q9P2J2 1179 aa4.42□□□□□ -1.7
SCFD1-210ENST00000553693 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
SCFD1-210ENST00000553693 SLC38A8A6NNN8 435 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 ABCB4P21439 1286 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 SLC16A2P36021 539 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 TECP42680 631 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 STARD3Q14849 445 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 ARL13AQ5H913 290 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-210ENST00000553693 ENTPD8Q5MY95 495 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 IL31Q6EBC2 164 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 RINLQ6ZS11 566 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 SRLQ86TD4 932 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 MORC1Q86VD1 984 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 GPSM1Q86YR5 675 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 CAMK1DQ8IU85 385 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 MED30Q96HR3 178 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 TMEM41AQ96HV5 264 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 SGCZQ96LD1 299 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 DCLK3Q9C098 648 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 IL21RQ9HBE5 538 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 ARFGAP3Q9NP61 516 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 DTX4Q9Y2E6 619 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 INSL5Q9Y5Q6 135 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 SLC4A4Q9Y6R1 1079 aa4.41□□□□□ -1.7
SCFD1-210ENST00000553693 EVPLQ92817 2033 aa4.4□□□□□ -1.7
SCFD1-210ENST00000553693 OR6C75A6NL08 312 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 ACOT8O14734 319 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 DNPH1O43598 174 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 PRC1O43663 620 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CYP1A2P05177 515 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 HMGB1P09429 215 aaKnown RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 HOXC6P09630 235 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 LTBQ06643 244 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 GPR18Q14330 331 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 TBRG1Q3YBR2 411 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 TRIM60Q495X7 471 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 OTUD1Q5VV17 481 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 ZNF324BQ6AW86 544 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CAPRIN2Q6IMN6 1127 aaKnown RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CCSAPQ6IQ19 270 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CCDC25Q86WR0 208 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 DPP10Q8N608 796 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 ENDOVQ8N8Q3 282 aaKnown RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 HMGB4Q8WW32 186 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 IP6K1Q92551 441 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 FAM84BQ96KN1 310 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 SORBS1Q9BX66 1292 aaKnown RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 VPS33BQ9H267 617 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 PLAC1Q9HBJ0 212 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 ARNT2Q9HBZ2 717 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 CD93Q9NPY3 652 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 LIN7CQ9NUP9 197 aaKnown RBP4.4□□□□□ -1.71
SCFD1-210ENST00000553693 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
SCFD1-210ENST00000553693 GOLGA6L3A6NEY3 463 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 EFCAB8A8MWE9 144 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 SPRY3O43610 288 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 FGF3P11487 239 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 PEPDP12955 493 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 ARSBP15848 533 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 CDK7P50613 346 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 NEK3P51956 506 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 OAZ1P54368 228 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 SLC4A8Q2Y0W8 1093 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 ATPAF1Q5TC12 328 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 AAGABQ6PD74 315 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 SLC16A12Q6ZSM3 486 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 Q6ZTK2 550 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 CTU1Q7Z7A3 348 aaKnown RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 FAM186BQ8IYM0 893 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 RBMXL3Q8N7X1 1067 aaKnown RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 FAM71BQ8TC56 605 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 PHF21BQ96EK2 531 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 MECRQ9BV79 373 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 SEZ6LQ9BYH1 1024 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 MAGEH1Q9H213 219 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 ACTR5Q9H9F9 607 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-210ENST00000553693 FZD10Q9ULW2 581 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 ICKQ9UPZ9 632 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
SCFD1-210ENST00000553693 SAC3D1A6NKF1 404 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 AQP12BA6NM10 295 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 PLA2G2AP14555 144 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 HOXA11P31270 313 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms