RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ERCC2P18074 760 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CCNE1P24864 410 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 POLR2BP30876 1174 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 POU4F1Q01851 419 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 POU4F3Q15319 338 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 MPP7Q5T2T1 576 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 BNC2Q6ZN30 1099 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 RNF135Q8IUD6 432 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM172AQ8WUF8 416 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CTRCQ99895 268 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TLR10Q9BXR5 811 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 RACGAP1Q9H0H5 632 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 HIPK3Q9H422 1215 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 RANBP3Q9H6Z4 567 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 A0A1B0GW55 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM149AA5PLN7 773 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 C9IYK1 514 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 SEMA3EO15041 775 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 APOC3P02656 99 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 UGT2B4P06133 528 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CD63P08962 238 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L2P0CJ85 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L3P0CJ86 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L4P0CJ87 422 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L5P0CJ88 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L6P0CJ89 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4L7P0CJ90 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ATXN8OSP0DMR3 200 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF23P17027 643 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CLCQ05315 142 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TFDP1Q14186 410 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 PLEKHG6Q3KR16 790 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 MTX3Q5HYI7 312 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 C6orf10Q5SRN2 563 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 IDO2Q6ZQW0 420 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF555Q8NEP9 628 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CRELD1Q96HD1 420 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 BBS4Q96RK4 519 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 PTPRHQ9HD43 1115 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 IGSF9Q9P2J2 1179 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DUX4Q9UBX2 424 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CDC14AQ9UNH5 594 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CBR1P16152 277 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ACADLP28330 430 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 CSKP41240 450 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RNF4P78317 190 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 FSTL1Q12841 308 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 IL23RQ5VWK5 629 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 C16orf89Q6UX73 402 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 OFCC1Q8IZS5 231 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC37A3Q8NCC5 494 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ARL5BQ96KC2 179 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RMND5AQ9H871 391 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ANKMY1Q9P2S6 941 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC9A8Q9Y2E8 581 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 MAST3O60307 1309 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 NARSO43776 548 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 PRKCAP17252 672 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 GSTM2P28161 218 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 MAZP56270 477 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 INTS11Q5TA45 600 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 KIAA1522Q9P206 1035 aaPredicted RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 DCDC2Q9UHG0 476 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ANAPC7Q9UJX3 599 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 NUDT5Q9UKK9 219 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.949e-7■□□□□ 8.5
GTF2A1-203ENST00000553612 ERGIC3Q9Y282 383 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ABCC12Q96J65 1359 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 EYA2O00167 538 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ERVK-10P10266 1014 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 MAGEA2P43356 314 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ARSEP51690 589 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ACTR3P61158 418 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 STAT4Q14765 748 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 ZCCHC12Q6PEW1 402 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM92BQ6ZTR7 304 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 PQLC1Q8N2U9 271 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 APOL4Q9BPW4 351 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 MOCS1Q9NZB8 636 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 PPP2R3BQ9Y5P8 575 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RTL9Q8NET4 1388 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RFPL2O75678 378 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 THRAP10827 490 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 NSFP46459 744 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 LIMK1P53667 647 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 DSC1Q08554 894 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 NFX1Q12986 1120 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 RAPSNQ13702 412 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 DARS2Q6PI48 645 aaKnown RBP9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 CADM3Q8N126 398 aa9.16□□□□□ -0.94
GTF2A1-203ENST00000553612 FANCBQ8NB91 859 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms