RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 FOXJ1Q92949 421 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 TRIM11Q96F44 468 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 CNPY3Q9BT09 278 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 ZYG11BQ9C0D3 744 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 PRSS16Q9NQE7 514 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 ANLNQ9NQW6 1124 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 USP36Q9P275 1121 aaKnown RBP15.78■□□□□ 0.12
SHMT2-204ENST00000553324 OR12D3Q9UGF7 316 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 CYP8B1Q9UNU6 501 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 GVINP1Q7Z2Y8 2422 aa15.78■□□□□ 0.12
SHMT2-204ENST00000553324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 EDDM13A0A1B0GTR0 161 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 TCRBV5S1A1TA0A578 114 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 TMCO5BA8MYB1 307 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 I6L893 689 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 IGLV3-19P01714 112 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 DNTTP04053 509 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 SERPING1P05155 500 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MYBL1P10243 752 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 RRM1P23921 792 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 OR1E1P30953 314 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 HOXD12P35452 270 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 ID4P47928 161 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 TPMTP51580 245 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 PPP1R15BQ5SWA1 713 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 SYCP2LQ5T4T6 812 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 LYSMD4Q5XG99 296 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 ZNF783Q6ZMS7 281 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 CYP2U1Q7Z449 544 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 SLFN11Q7Z7L1 901 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 SYT12Q8IV01 421 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 TMEFF1Q8IYR6 380 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 FRMD1Q8N878 549 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 NTAN1Q96AB6 310 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 ERLEC1Q96DZ1 483 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MYO19Q96H55 970 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 ZNF419Q96HQ0 510 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MRGPRX3Q96LB0 322 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MCEEQ96PE7 176 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 C2orf49Q9BVC5 232 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MUC3BQ9H195 1237 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 MRPL47Q9HD33 250 aaKnown RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 WSB2Q9NYS7 404 aaPredicted RBP15.77■□□□□ 0.12
SHMT2-204ENST00000553324 SLC25A13Q9UJS0 675 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 VPS28Q9UK41 221 aa15.77■□□□□ 0.12
SHMT2-204ENST00000553324 ZNF292O60281 2723 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 DDX3XO00571 662 aaKnown RBP eCLIP15.76■□□□□ 0.118e-15■■□□□ 14.3
SHMT2-204ENST00000553324 CNTN5O94779 1100 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 RHOCP08134 193 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 SKILP12757 684 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 GGCXP38435 758 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 HDAC4P56524 1084 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 MAMLD1Q13495 774 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 TRIM14Q14142 442 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 TTC31Q49AM3 519 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 ALFQ53S48 1182 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 TDRD12Q587J7 1177 aaKnown RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 SH3PXD2AQ5TCZ1 1133 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 ZNF776Q68DI1 518 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 PLEKHA7Q6IQ23 1121 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 RABEPKQ7Z6M1 372 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 CADM4Q8NFZ8 388 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 CEP76Q8TAP6 659 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 ALG14Q96F25 216 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 RPL10LQ96L21 214 aaKnown RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 NCAPGQ9BPX3 1015 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 XPO4Q9C0E2 1151 aaKnown RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 SLC6A17Q9H1V8 727 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 RSPH9Q9H1X1 276 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-204ENST00000553324 TAS2R14Q9NYV8 317 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 SLCO3A1Q9UIG8 710 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 NCKAP1Q9Y2A7 1128 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 OR51B4Q9Y5P0 310 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 SCINQ9Y6U3 715 aa15.76■□□□□ 0.11
SHMT2-204ENST00000553324 ILVBLA1L0T0 632 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 KHNYNO15037 678 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 GJB6O95452 261 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 PLEKP08567 350 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 TPM1P09493 284 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 ETFBP38117 255 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 CTSOP43234 321 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 RPS14P62263 151 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 RPL7AP62424 266 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 SLC20A2Q08357 652 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 SCAPQ12770 1279 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 PUM1Q14671 1186 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 AASDHQ4L235 1098 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 WDR45BQ5MNZ6 344 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 C9orf64Q5T6V5 341 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-204ENST00000553324 SPECC1LQ69YQ0 1117 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 SCYL2Q6P3W7 929 aa15.75■□□□□ 0.11
SHMT2-204ENST00000553324 ZNF366Q8N895 744 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms