RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SLC12A1Q13621 1099 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 SND1Q7KZF4 910 aaKnown RBP eCLIP16.37■□□□□ 0.216e-10■□□□□ 11.2
CDK4-215ENST00000553237 PHLDB2Q86SQ0 1253 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 PIP4P1Q86T03 277 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 STK40Q8N2I9 435 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 OR52K2Q8NGK3 314 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 FAM129BQ96TA1 746 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 PABPC3Q9H361 631 aaKnown RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 SLC32A1Q9H598 525 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 TMPRSS4Q9NRS4 437 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 SERGEFQ9UGK8 458 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 ACACBO00763 2458 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 PCDH15Q96QU1 1955 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 SPAARA0A1B0GVQ0 90 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 A0A1W2PP55 124 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
CDK4-215ENST00000553237 CNTN5O94779 1100 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 CD59P13987 128 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
CDK4-215ENST00000553237 SLC8A1P32418 973 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 SOX5P35711 763 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 FLT3P36888 993 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 NNMTP40261 264 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 PLK1P53350 603 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 MYL5Q02045 173 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 FOXC1Q12948 553 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 MTA1Q13330 715 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 ARID5BQ14865 1188 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 SYCP1Q15431 976 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 CST6Q15828 149 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 BRMS1LQ5PSV4 323 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 TRNP1Q6NT89 227 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 C1orf216Q8TAB5 229 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 PTPRN2Q92932 1015 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 NT5C3BQ969T7 300 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 BIRC7Q96CA5 298 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 ALG14Q96F25 216 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 FEM1AQ9BSK4 669 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 PCED1AQ9H1Q7 454 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 NEUROG2Q9H2A3 272 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 SGK2Q9HBY8 427 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 DNAAF2Q9NVR5 837 aaKnown RBP16.36■□□□□ 0.21
CDK4-215ENST00000553237 ARHGEF38Q9NXL2 777 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 NOCTQ9UK39 431 aaKnown RBP16.36■□□□□ 0.21
CDK4-215ENST00000553237 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
CDK4-215ENST00000553237 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.36■□□□□ 0.21
CDK4-215ENST00000553237 CACNA1EQ15878 2313 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 A0A1B0GVT2 93 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 RNASEH2AO75792 299 aaKnown RBP16.35■□□□□ 0.21
CDK4-215ENST00000553237 F9P00740 461 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 CHRNB2P17787 502 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 SCNN1AP37088 669 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 PSMD8P48556 350 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 CSNK1EP49674 416 aaKnown RBP16.35■□□□□ 0.21
CDK4-215ENST00000553237 OXCT1P55809 520 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 JAM2P57087 298 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 FMO1Q01740 532 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 CDR2Q01850 454 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 BNC1Q01954 994 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 SULT2A1Q06520 285 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ALFQ53S48 1182 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ZNF677Q86XU0 584 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ANKRD20A12PQ8NF67 263 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 SLC30A5Q8TAD4 765 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 PGAP3Q96FM1 320 aaPredicted RBP16.35■□□□□ 0.21
CDK4-215ENST00000553237 CFAP57Q96MR6 1250 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 CAMK1GQ96NX5 476 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 OMDQ99983 421 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ZDHHC5Q9C0B5 715 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 LIMA1Q9UHB6 759 aaKnown RBP16.35■□□□□ 0.21
CDK4-215ENST00000553237 TMEM59LQ9UK28 342 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 SCML1Q9UN30 329 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
CDK4-215ENST00000553237 LGALS16A8MUM7 142 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 UPK3BL1B0FP48 263 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 UPK3BL2E5RIL1 263 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 SH3BP5O60239 455 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 CLDN11O75508 207 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 GJB3O75712 270 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 TOP3BO95985 862 aaKnown RBP16.34■□□□□ 0.21
CDK4-215ENST00000553237 IL1BP01584 269 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 SPINK2P20155 84 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 STAT1P42224 750 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 GALCP54803 685 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 CDH4P55283 916 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 FAM193AP78312 1265 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 SIM1P81133 766 aaPredicted RBP16.34■□□□□ 0.21
CDK4-215ENST00000553237 UBXN1Q04323 297 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 C5orf22Q49AR2 442 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
CDK4-215ENST00000553237 USP30Q70CQ3 517 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms