RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 ARHGAP18Q8N392 663 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 OTUD6BQ8N6M0 293 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 BRD8Q9H0E9 1235 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 GBA3Q9H227 469 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 TLR8Q9NR97 1041 aaKnown RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC17A7Q9P2U7 560 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 GRID1Q9ULK0 1009 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 TLR6Q9Y2C9 796 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 MIA3Q5JRA6 1907 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 H7C4K7 107 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 FGF10O15520 208 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 ATP9BO43861 1147 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 C1QAP02745 245 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 PYGBP11216 843 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 FOXN2P32314 431 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 CD68P34810 354 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 COG7P83436 770 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 MROH9Q5TGP6 573 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 PIK3R6Q5UE93 754 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 OTOP3Q7RTS5 596 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 C10orf67Q8IYJ2 551 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 FBXO22Q8NEZ5 403 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 DIS3LQ8TF46 1054 aaKnown RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 THOC1Q96FV9 657 aaKnown RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 GORASP1Q9BQQ3 440 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC39A8Q9C0K1 460 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 IQCGQ9H095 443 aaKnown RBP9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 RPS6KL1Q9Y6S9 549 aa9.3□□□□□ -0.92
RAB3IP-218ENST00000553099 KCNU1A8MYU2 1149 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ADAM12O43184 909 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 RTN3O95197 1032 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ZWINTO95229 277 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 AP2A1O95782 977 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CCNB1P14635 433 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 PGAM1P18669 254 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CRYMQ14894 314 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 LGSNQ5TDP6 509 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 RASIP1Q5U651 963 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CCDC121Q6ZUS5 278 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 LRRC8CQ8TDW0 803 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 DENND1AQ8TEH3 1009 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 VAT1Q99536 393 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 TMEM175Q9BSA9 504 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 MLPHQ9BV36 600 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 MARCH2Q9P0N8 246 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 TRHDEQ9UKU6 1024 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC12A8A0AV02 714 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CCDC78A2IDD5 438 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 HGSO14964 777 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 KRT38O76015 456 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 VNN2O95498 520 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CXCL10P02778 98 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SNRPAP09012 282 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 GSTA2P09210 222 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC2A3P11169 496 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 NEFHP12036 1026 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 TAC1P20366 129 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 OR1D2P34982 312 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 IKBKEQ14164 716 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 MANEALQ5VSG8 457 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ANKRD33Q7Z3H0 272 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ARHGAP12Q8IWW6 846 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 BANPQ8N9N5 519 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SPATA22Q8NHS9 363 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ARNTL2Q8WYA1 636 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CDKL2Q92772 493 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 ALKBH8Q96BT7 664 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 APOPT1Q96IL0 206 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 TEKT5Q96M29 485 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 PITPNM3Q9BZ71 974 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 CCSER2Q9H7U1 834 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 SLCO1B3Q9NPD5 702 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
RAB3IP-218ENST00000553099 FAM159BA6NKW6 160 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 COPEO14579 308 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SNX3O60493 162 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF189O75820 626 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MT-CYBP00156 380 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 POLBP06746 335 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 HAPLN1P10915 354 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TPH1P17752 444 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ATF6P18850 670 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 HOXC13P31276 330 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 LIG3P49916 1009 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CORO7P57737 925 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PRPSAP1Q14558 356 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 USP41Q3LFD5 358 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MS4A13Q5J8X5 152 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 RAP1GAP2Q684P5 730 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MSANTD2Q6P1R3 559 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PIGWQ7Z7B1 504 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms