RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 STAT6P42226 847 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 YWHAGP61981 247 aaKnown RBP eCLIP11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 UBE2HP62256 183 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 SPOPLQ6IQ16 392 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 RSRC2Q7L4I2 434 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 CLEC14AQ86T13 490 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 PRPF39Q86UA1 669 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 FIBINQ8TAL6 211 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 APOLD1Q96LR9 279 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 KLHL11Q9NVR0 708 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 DMAC2Q9NW81 257 aa11.79□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3DA0A087WVF3 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3IA0A087WXS9 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3EA0A087X179 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3KA0A087X1G2 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 GOLGA6L4A6NEF3 574 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3FA6NER0 549 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TTC34A8MYJ7 566 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ADH1BP00325 375 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 RBMS1P29558 406 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 UBAP2LQ14157 1087 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 FAM133BQ5BKY9 247 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 C3orf38Q5JPI3 329 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 FAM26FQ5R3K3 315 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TMC6Q7Z403 805 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TRIM69Q86WT6 500 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 NELFCDQ8IXH7 590 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 STK40Q8N2I9 435 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 CCNL2Q96S94 520 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 CAAP1Q9H8G2 361 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 CYP3A43Q9HB55 503 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 USP29Q9HBJ7 922 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 APOBEC3GQ9HC16 384 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ATXN7L1Q9ULK2 861 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ERVW-1Q9UQF0 538 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ENTPD2Q9Y5L3 495 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 MORC2Q9Y6X9 1032 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 ITPR2Q14571 2701 aa11.78□□□□□ -0.52
SUPT16H-202ENST00000552829 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SPTLC2O15270 562 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 EXOC3O60645 756 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 TBL1XO60907 577 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 PIAS2O75928 621 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 KIF20AO95235 890 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 YEATS4O95619 227 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SRPRAP08240 638 aaKnown RBP11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 MYF5P13349 255 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 TGM2P21980 687 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC6A4P31645 630 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 ME1P48163 572 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 PSMD8P48556 350 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 DUSP3P51452 185 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 METAP1P53582 386 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 ST8SIA6P61647 398 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 DLG4P78352 724 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 KCNMA1Q12791 1236 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 STAT4Q14765 748 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SGO2Q562F6 1265 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 RFWD3Q6PCD5 774 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SV2AQ7L0J3 742 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 TMEM145Q8NBT3 493 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 KLHDC7BQ96G42 594 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 ATXN7L3BQ96GX2 97 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 OSBPL2Q9H1P3 480 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 NLGN3Q9NZ94 848 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SLCO3A1Q9UIG8 710 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 CA5BQ9Y2D0 317 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 SCN8AQ9UQD0 1980 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 TRPM6Q9BX84 2022 aa11.77□□□□□ -0.53
SUPT16H-202ENST00000552829 PRAMEF26H0Y7S4 382 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 FFAR2O15552 330 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 IRAK2O43187 625 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 SLC7A4O43246 635 aa11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 PLRG1O43660 514 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-202ENST00000552829 ZBED1O96006 694 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms