RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TUBGCP3Q96CW5 907 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 PERPQ96FX8 193 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 GIMAP4Q9NUV9 329 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 ARHGAP20Q9P2F6 1191 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 MID2Q9UJV3 735 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 CYP2D7A0A087X1C5 515 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ZSCAN5CA6NGD5 496 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 MYO1GB0I1T2 1018 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GPR89AB7ZAQ6 455 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GPR42O15529 346 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 DDHD2O94830 711 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 MATN4O95460 622 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GJB1P08034 283 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GPR89BP0CG08 455 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 XRCC6P12956 609 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP44-208ENST00000552440 FDPSP14324 419 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 IL13RA1P78552 427 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 EXOSC9Q06265 439 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 CD69Q07108 199 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SCN1BQ07699 218 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TDGQ13569 410 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 DGKDQ16760 1214 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 MEP1BQ16820 701 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CCDC40Q4G0X9 1142 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 C12orf60Q5U649 245 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ARHGAP11AQ6P4F7 1023 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ABHD15Q6UXT9 468 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GADL1Q6ZQY3 521 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 LINC00696Q6ZRV3 163 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 YAF2Q8IY57 180 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ELOA2Q8IYF1 753 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 RTL3Q8N8U3 475 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 PCSK9Q8NBP7 692 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 IFI44Q8TCB0 444 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 KCNE4Q8WWG9 221 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SLC5A11Q8WWX8 675 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CPT1BQ92523 772 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 DYDC2Q96IM9 177 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 NLRP4Q96MN2 994 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM118BQ9BPY3 351 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TTPALQ9BTX7 342 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 INTS2Q9H0H0 1204 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 ABCG8Q9H221 673 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TM9SF3Q9HD45 589 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 LIMA1Q9UHB6 759 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 APPL1Q9UKG1 709 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A18PA6NE21 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A16PA6NEW6 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A9PA6NNJ1 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A5PA8MXJ8 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 H0Y858 1186 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TLR2O60603 784 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 E2F6O75461 281 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 PSMD10O75832 226 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 LY86O95711 162 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ANXA6P08133 673 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 INHBAP08476 426 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A15PP0C7V4 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 FAM90A14PP0C7W9 464 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 HSPA5P11021 654 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 SERPINA4P29622 427 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ADRA1BP35368 520 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SKIV2L2P42285 1042 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 CASP3P42574 277 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 KCNJ5P48544 419 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ZNF81P51508 661 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 YPEL5P62699 121 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CD83Q01151 205 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CETN1Q12798 172 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CUL2Q13617 745 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 PTK6Q13882 451 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CAPSQ13938 189 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CRYMQ14894 314 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 PRKD1Q15139 912 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 CDSNQ15517 529 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SKIDA1Q1XH10 827 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 NRN1LQ496H8 165 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 USP39Q53GS9 565 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 ATXN7L2Q5T6C5 722 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 NCEH1Q6PIU2 408 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 GBP6Q6ZN66 633 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 Q6ZUG5 572 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SYCP3Q8IZU3 236 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SYT2Q8N9I0 419 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 DTX3Q8N9I9 347 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 ZCCHC10Q8TBK6 192 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 HASPINQ8TF76 798 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 MRPS27Q92552 414 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 GIMAP5Q96F15 307 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TMX3Q96JJ7 454 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 RBM14Q96PK6 669 aaKnown RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms