RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 DYNC1LI2O43237 492 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 ATP9BO43861 1147 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PDE5AO76074 875 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 SORBS2O94875 1100 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 NPR3P17342 541 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 ERCC2P18074 760 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 IGFBP6P24592 240 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 TKTL1P51854 596 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 MAP3K7CLP57077 242 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 LILRA4P59901 499 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 USP4Q13107 963 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 DPYSQ14117 519 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 DLG2Q15700 870 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 SV2CQ496J9 727 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PDPK2PQ6A1A2 396 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 IZUMO2Q6UXV1 221 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PSTKQ8IV42 348 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 WNT8BQ93098 351 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 CCDC124Q96CT7 223 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 DNAI2Q9GZS0 605 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 IGSF9Q9P2J2 1179 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 CACNG4Q9UBN1 327 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PDHXO00330 501 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PTPN3P26045 913 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PNPLA4P41247 253 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PYDC1Q8WXC3 89 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
CACNB3-219ENST00000551544 LRRC40Q9H9A6 602 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 MAN1C1Q9NR34 630 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 BFARQ9NZS9 450 aa13.34□□□□□ -0.27
CACNB3-219ENST00000551544 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 NRP1O14786 923 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 DCLK1O15075 740 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 XPOTO43592 962 aaKnown RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 SPRP35270 261 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 IRF9Q00978 393 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 INSCQ1MX18 579 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 CFAP157Q5JU67 520 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 RNF220Q5VTB9 566 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 HIPK4Q8NE63 616 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 SLC10A4Q96EP9 437 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 MFSD3Q96ES6 412 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 RBBP8Q99708 897 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 STN1Q9H668 368 aaKnown RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ACSS2Q9NR19 701 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 DNAJC28Q9NX36 388 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 CCDC78A2IDD5 438 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 GOLGA8TH3BQL2 631 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ZBTB24O43167 697 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 HSPA4LO95757 839 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 AMHP03971 560 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 UBTFL6P0CB48 400 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 TPH1P17752 444 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ADRA1BP35368 520 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 RPS6KA3P51812 740 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 TPI1P60174 286 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 PPP2R5DQ14738 602 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 GSTA3Q16772 222 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 CLEC20AQ6ZU45 233 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 PHTF2Q8N3S3 785 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 GATA6Q92908 595 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 GORASP1Q9BQQ3 440 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ULBP1Q9BZM6 244 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 UBP1Q9NZI7 540 aa13.33□□□□□ -0.28
CACNB3-219ENST00000551544 ZNF638Q14966 1978 aaKnown RBP13.33□□□□□ -0.28
CACNB3-219ENST00000551544 A0A096LPK6 155 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 E9PBE3 544 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 DCXO43602 365 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 KLHL41O60662 606 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SERPINB8P50452 374 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SNX17Q15036 470 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 LRRC36Q1X8D7 754 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 PRAMEF19Q5SWL8 479 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 NAPRTQ6XQN6 538 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 ZNF781Q8N8C0 355 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 SLC26A7Q8TE54 656 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 MOCOSQ96EN8 888 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 MAML3Q96JK9 1138 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
CACNB3-219ENST00000551544 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms