RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CFAP52Q8N1V2 620 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 OXR1Q8N573 874 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 AADATQ8N5Z0 425 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 SAP25Q8TEE9 199 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-221ENST00000550914 PTPRN2Q92932 1015 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 FAM131CQ96AQ9 280 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 THAP9Q9H5L6 903 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 ERVMER34-1Q9H9K5 563 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 EBF2Q9HAK2 575 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-221ENST00000550914 SLC12A6Q9UHW9 1150 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 SLCO3A1Q9UIG8 710 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 CEP83Q9Y592 693 aa13.28□□□□□ -0.28
PTCH1-221ENST00000550914 CFAP46Q8IYW2 2715 aa13.27□□□□□ -0.28
PTCH1-221ENST00000550914 A0A087WV48 116 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 F5H5T6 163 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ENC1O14682 589 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 SLC7A4O43246 635 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 TRUB2O95900 331 aaKnown RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 MOCS2O96007 188 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 CALCAP01258 141 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 WNT1P04628 370 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ABCB4P21439 1286 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 PSMD8P48556 350 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ARRB1P49407 418 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 PLK1P53350 603 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ADPRHP54922 357 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 YWHAZP63104 245 aaKnown RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 NUCB2P80303 420 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 IL9RQ01113 521 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 CYP4F3Q08477 520 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 MTA1Q13330 715 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 SOWAHCQ53LP3 525 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ZC3H12AQ5D1E8 599 aaKnown RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ENOSF1Q7L5Y1 443 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 CHSY1Q86X52 802 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 ATP6V0D2Q8N8Y2 350 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 FAM81BQ96LP2 452 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 SPAG5Q96R06 1193 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 PPP1R9BQ96SB3 815 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 XPO7Q9UIA9 1087 aaKnown RBP13.27□□□□□ -0.29
PTCH1-221ENST00000550914 SHROOM3Q8TF72 1996 aa13.27□□□□□ -0.29
PTCH1-221ENST00000550914 A0A1B0GVM2 712 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 TCAF2A6NFQ2 919 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 E5RJQ4 531 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 ITGAVP06756 1048 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 GLI1P08151 1106 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 KRT5P13647 590 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 MZF1P28698 734 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 HNF1BP35680 557 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 RXRGP48443 463 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 NXPH1P58417 271 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 OVGP1Q12889 678 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 SHBQ15464 509 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 RABGAP1LQ5R372 815 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 RAP1GAP2Q684P5 730 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 KLHL10Q6JEL2 608 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 DSG4Q86SJ6 1040 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 IQCHQ86VS3 1027 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 STK40Q8N2I9 435 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 MFSD2AQ8NA29 543 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 OR14C36Q8NHC7 312 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 HNRNPLLQ8WVV9 542 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 NELFBQ8WX92 580 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 ZNF606Q8WXB4 792 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 SERAC1Q96JX3 654 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 PRMT1Q99873 361 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 INTS2Q9H0H0 1204 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 MAN1B1Q9UKM7 699 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 DMTF1Q9Y222 760 aa13.26□□□□□ -0.29
PTCH1-221ENST00000550914 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 SETXQ7Z333 2677 aaKnown RBP13.26□□□□□ -0.29
PTCH1-221ENST00000550914 FAM149AA5PLN7 773 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 TLR4O00206 839 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 ALOX15BO15296 676 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 MAGEC1O60732 1142 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 RFPL3O75679 317 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-221ENST00000550914 LDOC1O95751 146 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-221ENST00000550914 IL1BP01584 269 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 EPHA8P29322 1005 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-221ENST00000550914 DRD3P35462 400 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-221ENST00000550914 CDK17Q00537 523 aa13.25□□□□□ -0.29
PTCH1-221ENST00000550914 ILKQ13418 452 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms