RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
RAB5B-208ENST00000550283 CACNA1GO43497 2377 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 ZNF292O60281 2723 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 AKR1B15C9JRZ8 316 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 TPM3P06753 285 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 DLDP09622 509 aaKnown RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 MIPP30301 263 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 ACVRL1P37023 503 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 METAP1P53582 386 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 SCAPQ12770 1279 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 TRIM14Q14142 442 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 EIF4HQ15056 248 aaKnown RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 SLC18A3Q16572 532 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 MAP7D1Q3KQU3 841 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 FNDC3BQ53EP0 1204 aaKnown RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 RABGAP1LQ5R372 815 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 TP53INP2Q8IXH6 220 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 DRC7Q8IY82 874 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 CAMKK1Q8N5S9 505 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 KCNV2Q8TDN2 545 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 WFIKKN2Q8TEU8 576 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 NTAN1Q96AB6 310 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 IQCDQ96DY2 449 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 SNRNP25Q9BV90 132 aaKnown RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 DUSP15Q9H1R2 295 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 NHEJ1Q9H9Q4 299 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 PARD6AQ9NPB6 346 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 PRSS16Q9NQE7 514 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
RAB5B-208ENST00000550283 OTOGLQ3ZCN5 2332 aa11.53□□□□□ -0.56
RAB5B-208ENST00000550283 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
RAB5B-208ENST00000550283 DOCK4Q8N1I0 1966 aa11.52□□□□□ -0.56
RAB5B-208ENST00000550283 CKAP5Q14008 2032 aa11.52□□□□□ -0.56
RAB5B-208ENST00000550283 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 A0A0U1RQJ8 604 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SSU72P8A0A1W2PR75 194 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 GFRA3O60609 400 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SIN3BO75182 1162 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 ZMPSTE24O75844 475 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 CD160O95971 181 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 EPHX1P07099 455 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 POLR2EP19388 210 aaKnown RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 TGM1P22735 817 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 P2RY2P41231 377 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 PLK1P53350 603 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 CDH4P55283 916 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 NRG1Q02297 640 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 CAMK2GQ13555 558 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 CCDC6Q16204 474 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 ATP13A4Q4VNC1 1196 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SERPINA13PQ6UXR4 307 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 LINGO4Q6UY18 593 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 LEKR1Q6ZMV7 388 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 DEFB119Q8N690 84 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 FRS2Q8WU20 508 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 GAB3Q8WWW8 586 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 VOPP1Q96AW1 172 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 SMOC1Q9H4F8 434 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-208ENST00000550283 DNAI1Q9UI46 699 aa11.52□□□□□ -0.57
RAB5B-208ENST00000550283 LAMA1P25391 3075 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 CCDC163A0A0D9SF12 145 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 ANKRD62A6NC57 917 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 CLDN11O75508 207 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 LMNAP02545 664 aaKnown RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 RHOCP08134 193 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 NRLP54845 237 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 TAS2R40P59535 323 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 SIM2Q14190 667 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 SMTNL2Q2TAL5 461 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 PLK5Q496M5 336 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 PREPLQ4J6C6 727 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 KCNT1Q5JUK3 1230 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 C9orf64Q5T6V5 341 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 TTC39BQ5VTQ0 682 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 RWDD4Q6NW29 188 aaKnown RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 PRR23BQ6ZRT6 265 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 TMEM139Q8IV31 216 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 FNIP1Q8TF40 1166 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 TRIM44Q96DX7 344 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 FAM129BQ96TA1 746 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 ZYG11BQ9C0D3 744 aa11.51□□□□□ -0.57
RAB5B-208ENST00000550283 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
RAB5B-208ENST00000550283 SERGEFQ9UGK8 458 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms