RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 CRY1Q16526 586 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 DPYSL2Q16555 572 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 PLEKHG6Q3KR16 790 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 CXorf57Q6NSI4 855 aaKnown RBP13.16□□□□□ -0.3
PFDN5-207ENST00000549759 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 SFTPA1Q8IWL2 248 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 HSPH1Q92598 858 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN5-207ENST00000549759 TMEM248Q9NWD8 314 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 HPCAL4Q9UM19 191 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 F5P12259 2224 aa13.16□□□□□ -0.3
PFDN5-207ENST00000549759 WASH4PA8MWX3 477 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PJA2O43164 708 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 SPOPO43791 374 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 RAMP2O60895 175 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
PFDN5-207ENST00000549759 HOXB2P14652 356 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 IL1R2P27930 398 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 MZF1P28698 734 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-207ENST00000549759 HOXA6P31267 233 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 IRAK1P51617 712 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PTPN5P54829 565 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 SATB1Q01826 763 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PDK2Q15119 407 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 FUT11Q495W5 492 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 FNDC3BQ53EP0 1204 aaKnown RBP13.15□□□□□ -0.3
PFDN5-207ENST00000549759 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 RETSATQ6NUM9 610 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 RFX8Q6ZV50 586 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 POLNQ7Z5Q5 900 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 NLRP14Q86W24 1093 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
PFDN5-207ENST00000549759 ACRBPQ8NEB7 543 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 TSTD1Q8NFU3 115 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 GABRG3Q99928 467 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 MAGEB5Q9BZ81 275 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 MAGEH1Q9H213 219 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-207ENST00000549759 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 DNAI1Q9UI46 699 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 STON1Q9Y6Q2 735 aa13.15□□□□□ -0.3
PFDN5-207ENST00000549759 CXorf51AA0A1B0GTR3 108 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SGK1O00141 431 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 APBB3O95704 486 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 HOXC13P31276 330 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 YBEYP58557 167 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 GNA12Q03113 381 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SLC20A2Q08357 652 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 ZNF234Q14588 700 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 POLD3Q15054 466 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 CA9Q16790 459 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 IL31Q6EBC2 164 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 DAAM2Q86T65 1068 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 APCDD1Q8J025 514 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 LZTR1Q8N653 840 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 CYB5D2Q8WUJ1 264 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 CACNA2D2Q9NY47 1150 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 INTS6Q9UL03 887 aaKnown RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 ERVW-1Q9UQF0 538 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
PFDN5-207ENST00000549759 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
PFDN5-207ENST00000549759 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
PFDN5-207ENST00000549759 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 KRT86O43790 486 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 BUB1BO60566 1050 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-207ENST00000549759 ADAM23O75077 832 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 EPHX1P07099 455 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 CCDC175P0C221 793 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 TCF4P15884 667 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 GOT1P17174 413 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 COMTP21964 271 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 IL12RB1P42701 662 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 WASP42768 502 aa13.13□□□□□ -0.31
PFDN5-207ENST00000549759 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-207ENST00000549759 NDST2P52849 883 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms