RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
TMEM116-208ENST00000549537 STRIP2Q9ULQ0 834 aa6.93□□□□□ -1.3
TMEM116-208ENST00000549537 INVSQ9Y283 1065 aa6.93□□□□□ -1.3
TMEM116-208ENST00000549537 HBS1LQ9Y450 684 aaKnown RBP6.93□□□□□ -1.3
TMEM116-208ENST00000549537 DMXL2Q8TDJ6 3036 aa6.93□□□□□ -1.3
TMEM116-208ENST00000549537 AKAP13Q12802 2813 aa6.93□□□□□ -1.3
TMEM116-208ENST00000549537 NUP205Q92621 2012 aa6.93□□□□□ -1.3
TMEM116-208ENST00000549537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 TCRBV21S2A2A0A5A6 115 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 BCLAF3A2AJT9 711 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 GTPBP10A4D1E9 387 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 SLC30A4O14863 429 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 TM4SF5O14894 197 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 MSI1O43347 362 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 FGFR1OPO95684 399 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 LATS1O95835 1130 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 LCP1P13796 627 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 HOXB2P14652 356 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 GABRG2P18507 467 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 SLC9A1P19634 815 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 PTMSP20962 102 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 SDHBP21912 280 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 PON1P27169 355 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 HOXD9P28356 352 aaPredicted RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 CHKAP35790 457 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 MPLP40238 635 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 EIF1AXP47813 144 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 LIMK1P53667 647 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ELF2Q15723 593 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 GEN1Q17RS7 908 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 USP39Q53GS9 565 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 TMEM215Q68D42 235 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 DENND1BQ6P3S1 775 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ENOSF1Q7L5Y1 443 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 TRMT11Q7Z4G4 463 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 KIAA0907Q7Z7F0 614 aaPredicted RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 C11orf74Q86VG3 221 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 FRMD1Q8N878 549 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 NETO1Q8TDF5 533 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ZNF606Q8WXB4 792 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 RLN3Q8WXF3 142 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 SHC3Q92529 594 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 BHMTQ93088 406 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 RTKNQ9BST9 563 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 CRACR2AQ9BSW2 395 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 SMOC1Q9H4F8 434 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 THAP9Q9H5L6 903 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 UBE2TQ9NPD8 197 aaPredicted RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ACP6Q9NPH0 428 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ABCC13Q9NSE7 274 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 LMBRD1Q9NUN5 540 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
TMEM116-208ENST00000549537 GCN1Q92616 2671 aaKnown RBP6.92□□□□□ -1.3
TMEM116-208ENST00000549537 THADAQ6YHU6 1953 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 CKAP5Q14008 2032 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 FLNBO75369 2602 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 LOC400499M0QZD8 3231 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 WASH3PC4AMC7 463 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 PAPSS1O43252 624 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 NDUFB5O43674 189 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RHOBTB1O94844 696 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 FBXO21O94952 628 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 IGLV3-25P01717 112 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 LTFP02788 710 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 KRT5P13647 590 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 GNA15P30679 374 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 SLC6A4P31645 630 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 WASP42768 502 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 HARS2P49590 506 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 SGSHP51688 502 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RING1Q06587 406 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 BIRC2Q13490 618 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 EIF4EBP2Q13542 120 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 EXOC3L4Q17RC7 722 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 FAM133BQ5BKY9 247 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 ADGRF1Q5T601 910 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 PEAR1Q5VY43 1037 aaPredicted RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 NADSYN1Q6IA69 706 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 TCEAL6Q6IPX3 200 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 GBP6Q6ZN66 633 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RBM43Q6ZSC3 357 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 BEND5Q7L4P6 421 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 TMEM110Q86TL2 294 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 CHPFQ8IZ52 775 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 WDTC1Q8N5D0 677 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 DQX1Q8TE96 717 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 IPO4Q8TEX9 1081 aaKnown RBP6.91□□□□□ -1.3
TMEM116-208ENST00000549537 RNF139Q8WU17 664 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 HMGB4Q8WW32 186 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 TCEAL3Q969E4 200 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 AZIN2Q96A70 460 aa6.91□□□□□ -1.3
TMEM116-208ENST00000549537 MYEOVQ96EZ4 313 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms