RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 GAB3Q8WWW8 586 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 LGMNQ99538 433 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 HESX1Q9UBX0 185 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 PTPRFP10586 1907 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 A0A0A0MRY4 1105 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
HDAC7-228ENST00000548938 G3V2L1 256 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 STX16-NPEPL1H3BU86 382 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 MLNP12872 115 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 EPHA3P29320 983 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ICAM3P32942 547 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 GP5P40197 560 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 DPP6P42658 865 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CCR10P46092 362 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 OAZ1P54368 228 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 PDK1Q15118 436 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 DLG2Q15700 870 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 LCLAT1Q6UWP7 414 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ZNF410Q86VK4 478 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CSPG4P5Q96PW8 444 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 FERMT1Q9BQL6 677 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CAB39LQ9H9S4 337 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 GMEB1Q9Y692 573 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 LCTP09848 1927 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 H3BSA7 217 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 P4HA1P13674 534 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ENO3P13929 434 aaPredicted RBP14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CCDC130P13994 396 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 GALK1P51570 392 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 EMP3P54852 163 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 NAB1Q13506 487 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 OLIG2Q13516 323 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 DPYSL2Q16555 572 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 USP41Q3LFD5 358 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 SH3D19Q5HYK7 790 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 METTL21CQ5VZV1 264 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 NCBP2-AS2Q69YL0 99 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CATSPER1Q8NEC5 780 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 KLHL32Q96NJ5 620 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
HDAC7-228ENST00000548938 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
HDAC7-228ENST00000548938 ARHGAP10A1A4S6 786 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 RGSL1A5PLK6 1076 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 GPR25O00155 361 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 ACKR2O00590 384 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 PPP2R5DQ14738 602 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.16
HDAC7-228ENST00000548938 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 CERS2Q96G23 380 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 HPDLQ96IR7 371 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 MARK4Q96L34 752 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 MINDY3Q9H8M7 445 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 CYP3A43Q9HB55 503 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 CIDEBQ9UHD4 219 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 BARX2Q9UMQ3 279 aaPredicted RBP14.02□□□□□ -0.16
HDAC7-228ENST00000548938 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 RPS6KL1Q9Y6S9 549 aa14.02□□□□□ -0.16
HDAC7-228ENST00000548938 PRSS51A0A1B0GVH4 220 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 PAPSS1O43252 624 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 IL18RAPO95256 599 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 CDH2P19022 906 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 PSMB4P28070 264 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 GARSP41250 739 aaKnown RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 SLC6A3Q01959 620 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 TTC30AQ86WT1 665 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 TMEM126BQ8IUX1 230 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 TRAPPC12Q8WVT3 735 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 FCRL3Q96P31 734 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 GATA5Q9BWX5 397 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-228ENST00000548938 SLC2A11Q9BYW1 496 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 TIMMDC1Q9NPL8 285 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 FAM49BQ9NUQ9 324 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 HOXC10Q9NYD6 342 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 HES2Q9Y543 173 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 CEPT1Q9Y6K0 416 aa14.02□□□□□ -0.17
HDAC7-228ENST00000548938 RNF103O00237 685 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 NOP56O00567 594 aaKnown RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ZSCAN9O15535 394 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TRMUO75648 421 aaKnown RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 GABBR2O75899 941 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CCDC166P0CW27 439 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 PTPN1P18031 435 aaKnown RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 MAGEA12P43365 314 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 NR2C2P49116 596 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 SERPINB8P50452 374 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 NR1H2P55055 460 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 MXD4Q14582 209 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CYTH1Q15438 398 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 PPP1R26Q5T8A7 1209 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 FAM160B1Q5W0V3 765 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms