RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 CCDC110Q8TBZ0 833 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 FATE1Q969F0 183 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CELF6Q96J87 481 aaKnown RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TTC25Q96NG3 672 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 PABPC3Q9H361 631 aaKnown RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 MED4Q9NPJ6 270 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 MPP6Q9NZW5 540 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 KLHL8Q9P2G9 620 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 STOML2Q9UJZ1 356 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CPQQ9Y646 472 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 NYNRINQ9P2P1 1898 aaKnown RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 A0A1W2PRU2 124 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6CA6NDK9 693 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF197O14709 1029 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 RAMP2O60895 175 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 CLDN11O75508 207 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 NEBLO76041 1014 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6DP0CG33 693 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 BMP8BP34820 402 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 ETFBP38117 255 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 PBX2P40425 430 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 PARP6Q2NL67 630 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 ARTNQ5T4W7 220 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 TFAP2DQ7Z6R9 452 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 PDIK1LQ8N165 341 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 CCDC33Q8N5R6 958 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 HJURPQ8NCD3 748 aaPredicted RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 MCUQ8NE86 351 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 NSMCE1Q8WV22 266 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 IGSF8Q969P0 613 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 TLE6Q9H808 572 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 GKN1Q9NS71 199 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6AQ9NYA3 693 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 IGSF9Q9P2J2 1179 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
RAB5B-204ENST00000548068 SH3BP1Q9Y3L3 701 aa12.68□□□□□ -0.38
RAB5B-204ENST00000548068 A0A1B0GVM2 712 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 TCAF2A6NFQ2 919 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6L10A6NI86 522 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 ERI2A8K979 691 aaKnown RBP12.67□□□□□ -0.38
RAB5B-204ENST00000548068 RASA4BC9J798 803 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 MATN3O15232 486 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 PSMD3O43242 534 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 RASA4O43374 803 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 RHOP08100 348 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 PTPN3P26045 913 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 OR1E1P30953 314 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 CHKAP35790 457 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 AVPR1AP37288 418 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 LMAN1P49257 510 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 WASHC5Q12768 1159 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 PRPSAP1Q14558 356 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 DUSP6Q16828 381 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 KCTD19Q17RG1 926 aaPredicted RBP12.67□□□□□ -0.38
RAB5B-204ENST00000548068 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
RAB5B-204ENST00000548068 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 GPR158Q5T848 1215 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 IQCKQ8N0W5 287 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 ARNTL2Q8WYA1 636 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 SLC39A8Q9C0K1 460 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 GBA3Q9H227 469 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 ETNK1Q9HBU6 452 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 XAB2Q9HCS7 855 aaKnown RBP12.67□□□□□ -0.38
RAB5B-204ENST00000548068 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 ARHGAP26Q9UNA1 814 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 PLAAQ9Y263 795 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 HCFC2Q9Y5Z7 792 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 NUP205Q92621 2012 aa12.67□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6L7A0A1B0GV03 622 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 KCNK1O00180 336 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 MAFKO60675 156 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 RFPL2O75678 378 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CNTN5O94779 1100 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 KLKB1P03952 638 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 APRTP07741 180 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 NUDT17P0C025 328 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CCNB1P14635 433 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 TSHRP16473 764 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SLC6A4P31645 630 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 MAGEA4P43358 317 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms