RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ESRRBO95718 433 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 OXSR1O95747 527 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 DPP6P42658 865 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 ACOT2P49753 483 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SOX10P56693 466 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SPP2Q13103 211 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 DNAJC14Q6Y2X3 702 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 NANOGNBQ7Z5D8 188 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 MPP5Q8N3R9 675 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 FAM156AQ8NDB6 213 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 CCDC68Q9H2F9 335 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 RPF2Q9H7B2 306 aaKnown RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 GID8Q9NWU2 228 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PCDHB12Q9Y5F1 795 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 A0A1W2PPW3 197 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 H3BMQ9 156 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 GOLGA8TH3BQL2 631 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PLOD2O00469 737 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 CLASP2O75122 1294 aaKnown RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 INHBBP09529 407 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 NFKBIAP25963 317 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PRAMEP78395 509 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 EGFLAMQ63HQ2 1017 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 THOC7Q6I9Y2 204 aaKnown RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 MOB2Q70IA6 237 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PTAR1Q7Z6K3 402 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 WDTC1Q8N5D0 677 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 EMC1Q8N766 993 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 ZNF280CQ8ND82 737 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 CMASQ8NFW8 434 aaPredicted RBP10.93□□□□□ -0.66
NPAS3-205ENST00000547068 KCNN1Q92952 543 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 CNDP1Q96KN2 507 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 COG8Q96MW5 612 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SLC29A1Q99808 456 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 ANKRD60Q9BZ19 345 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 CXorf21Q9HAI6 301 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SLC17A6Q9P2U8 582 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 GNPTGQ9UJJ9 305 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
NPAS3-205ENST00000547068 NEMP1O14524 444 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 LSM1O15116 133 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 CNOT3O75175 753 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 SULT1C4O75897 302 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 AMHP03971 560 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 PRKCGP05129 697 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 MX2P20592 715 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 MIPP30301 263 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 NUMBP49757 651 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ZNF132P52740 706 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 CNTN2Q02246 1040 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 BNIP3Q12983 259 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 NR1D2Q14995 579 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 MOGQ16653 247 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 LYSMD3Q7Z3D4 306 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 C4orf19Q8IY42 314 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 UNC5BQ8IZJ1 945 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ZNF786Q8N393 782 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 TDRD5Q8NAT2 981 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ACER1Q8TDN7 264 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 TMA16Q96EY4 203 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 CIB1Q99828 191 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 SDCBP2Q9H190 292 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 WDR55Q9H6Y2 383 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 PALMDQ9NP74 551 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 MRPL11Q9Y3B7 192 aaKnown RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 CCDC162PA2VCL2 907 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 J3QRK9 145 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 GABRB3P28472 473 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 RBL1P28749 1068 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ADORA2AP29274 412 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 LIG4P49917 911 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 BMXP51813 675 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 KCNC4Q03721 635 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 MTX3Q5HYI7 312 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 GPR107Q5VW38 600 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 TTC33Q6PID6 262 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ERO1BQ86YB8 467 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 SAMD3Q8N6K7 520 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ZNF420Q8TAQ5 688 aaPredicted RBP10.92□□□□□ -0.66
NPAS3-205ENST00000547068 SLC7A3Q8WY07 619 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 FBXL8Q96CD0 374 aa10.92□□□□□ -0.66
NPAS3-205ENST00000547068 ELP3Q9H9T3 547 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms