RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FUT11Q495W5 492 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 CIR1Q86X95 450 aaPredicted RBP14.88□□□□□ -0.03
DDX54-203ENST00000546869 PYROXD2Q8N2H3 581 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 BTBD6Q96KE9 485 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 SNRNP25Q9BV90 132 aaKnown RBP14.88□□□□□ -0.03
DDX54-203ENST00000546869 MAGEB5Q9BZ81 275 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 CIPCQ9C0C6 399 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 TMEM245Q9H330 911 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 CD248Q9HCU0 757 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 C2orf42Q9NWW7 574 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 MPP6Q9NZW5 540 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 PCSK1NQ9UHG2 260 aa14.88□□□□□ -0.03
DDX54-203ENST00000546869 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
DDX54-203ENST00000546869 IL1R2P27930 398 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 OR1E1P30953 314 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 CSKP41240 450 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 SLC1A1P43005 524 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 CSTF1Q05048 431 aaKnown RBP14.87□□□□□ -0.03
DDX54-203ENST00000546869 ZNF234Q14588 700 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
DDX54-203ENST00000546869 RASSF3Q86WH2 238 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 CHPFQ8IZ52 775 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 APCDD1Q8J025 514 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 TXLNBQ8N3L3 684 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 ZBTB44Q8NCP5 570 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 CCDC112Q8NEF3 446 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 FAM71BQ8TC56 605 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 ACOX2Q99424 681 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 CATSPERBQ9H7T0 1116 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 POLMQ9NP87 494 aaPredicted RBP14.87□□□□□ -0.03
DDX54-203ENST00000546869 STON1Q9Y6Q2 735 aa14.87□□□□□ -0.03
DDX54-203ENST00000546869 A0A1W2PQF6 199 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 PJA2O43164 708 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 RARAP10276 462 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 COL9A1P20849 921 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 MZF1P28698 734 aaPredicted RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 EPHB2P29323 1055 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 ETFBP38117 255 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 IL12RB1P42701 662 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 ECT2LQ008S8 904 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 CA9Q16790 459 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 RNF219Q5W0B1 726 aaPredicted RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 TMEM92Q6UXU6 159 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 POLNQ7Z5Q5 900 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 CCDC33Q8N5R6 958 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 RTL3Q8N8U3 475 aaKnown RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 OR52K2Q8NGK3 314 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 MYO19Q96H55 970 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 MRGPRX3Q96LB0 322 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 MAGEH1Q9H213 219 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 DHX35Q9H5Z1 703 aaKnown RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 ZSCAN32Q9NX65 697 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 ERVW-1Q9UQF0 538 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
DDX54-203ENST00000546869 PCDHGA2Q9Y5H1 932 aa14.86□□□□□ -0.03
DDX54-203ENST00000546869 H0Y858 1186 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 ARHGAP6O43182 974 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 CREB3O43889 395 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 ALDH1A2O94788 518 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 APBB3O95704 486 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 RHOCP08134 193 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 KRT7P08729 469 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 HOXB2P14652 356 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 TCF4P15884 667 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 CNR2P34972 360 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 VAV2P52735 878 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 YBEYP58557 167 aaPredicted RBP14.85□□□□□ -0.03
DDX54-203ENST00000546869 GNA12Q03113 381 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 SLC20A2Q08357 652 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 RFX8Q6ZV50 586 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 TFAP2DQ7Z6R9 452 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 WDR5BQ86VZ2 330 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 LONP2Q86WA8 852 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 LRRC8AQ8IWT6 810 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 UMODL1-AS1Q8N2C9 162 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 DCAF4L2Q8NA75 395 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 TSTD1Q8NFU3 115 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 SORCS1Q8WY21 1168 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 KCTD15Q96SI1 283 aaPredicted RBP14.85□□□□□ -0.03
DDX54-203ENST00000546869 C2orf49Q9BVC5 232 aaPredicted RBP14.85□□□□□ -0.03
DDX54-203ENST00000546869 ACE2Q9BYF1 805 aaPredicted RBP14.85□□□□□ -0.03
DDX54-203ENST00000546869 MUC3BQ9H195 1237 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 ZWILCHQ9H900 591 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 CACNA2D2Q9NY47 1150 aa14.85□□□□□ -0.03
DDX54-203ENST00000546869 RCOR3Q9P2K3 495 aaPredicted RBP14.85□□□□□ -0.03
DDX54-203ENST00000546869 CACNA1IQ9P0X4 2223 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 WASH3PC4AMC7 463 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 EEF2KO00418 725 aaKnown RBP14.84□□□□□ -0.03
DDX54-203ENST00000546869 LILRB5O75023 590 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 NNMTP40261 264 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 ARSEP51690 589 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 TPI1P60174 286 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 ST8SIA6P61647 398 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 MESDQ14696 234 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 STARD3Q14849 445 aa14.84□□□□□ -0.03
DDX54-203ENST00000546869 PDK2Q15119 407 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms