RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TFF2Q03403 129 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.7□□□□□ -1.34
NPAS3-204ENST00000546849 FOXF2Q12947 444 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 SEC23BQ15437 767 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 SLC9C1Q4G0N8 1177 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 LVRNQ6Q4G3 990 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 CYB5R4Q7L1T6 521 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 GALNT7Q86SF2 657 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 SCN4BQ8IWT1 228 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 FAM98AQ8NCA5 519 aaKnown RBP6.7□□□□□ -1.34
NPAS3-204ENST00000546849 NCSTNQ92542 709 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 CD180Q99467 661 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 HERC2P3Q9BVR0 1158 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 STN1Q9H668 368 aaKnown RBP6.7□□□□□ -1.34
NPAS3-204ENST00000546849 PDGFCQ9NRA1 345 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 GGA3Q9NZ52 723 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 TBX20Q9UMR3 447 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 PKP3Q9Y446 797 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 COX11Q9Y6N1 276 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 DCAF1Q9Y4B6 1507 aa6.7□□□□□ -1.34
NPAS3-204ENST00000546849 TMEM247A6NEH6 219 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 CD53P19397 219 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 KRT9P35527 623 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 PSMC2P35998 433 aaKnown RBP6.69□□□□□ -1.34
NPAS3-204ENST00000546849 SOX2P48431 317 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 PROK1P58294 105 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 ARHGAP8P85298 464 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 GPR68Q15743 365 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 NFIL3Q16649 462 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 SLC30A9Q6PML9 568 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 ZNF474Q6S9Z5 364 aaPredicted RBP6.69□□□□□ -1.34
NPAS3-204ENST00000546849 LRRC8DQ7L1W4 858 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 HEATR4Q86WZ0 1026 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 TMTC1Q8IUR5 882 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 BRSK2Q8IWQ3 736 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 OR52N4Q8NGI2 321 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 HTRA1Q92743 480 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 ATP2A3Q93084 1043 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 CRAMP1Q96RY5 1269 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 ZNF347Q96SE7 839 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 IFT27Q9BW83 186 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 SLC26A6Q9BXS9 759 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 CADM1Q9BY67 442 aaKnown RBP6.69□□□□□ -1.34
NPAS3-204ENST00000546849 KLHL13Q9P2N7 655 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
NPAS3-204ENST00000546849 CNOT7Q9UIV1 285 aaKnown RBP6.69□□□□□ -1.34
NPAS3-204ENST00000546849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 SLC22A23A1A5C7 686 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 PPP6CO00743 305 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 EPB41L2O43491 1005 aaKnown RBP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 HLA-DQA2P01906 255 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 HNRNPA1P09651 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 EPHB2P29323 1055 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 MPGP29372 298 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 CHRNA5P30532 468 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 HOXA7P31268 230 aaPredicted RBP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 CIITAP33076 1130 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 CPA2P48052 419 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 CYP2J2P51589 502 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 NHLH1Q02575 133 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 G3BP1Q13283 466 aaKnown RBP eCLIP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 STIM1Q13586 685 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 BYSLQ13895 437 aaKnown RBP6.68□□□□□ -1.34
NPAS3-204ENST00000546849 WDR45BQ5MNZ6 344 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 NAA35Q5VZE5 725 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 RETSATQ6NUM9 610 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 MTFR2Q6P444 385 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 MDGA2Q7Z553 956 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 P2RY11Q96G91 374 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 MASTLQ96GX5 879 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 PPM1MQ96MI6 270 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 SCNM1Q9BWG6 230 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 SEMA4CQ9C0C4 833 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 MROH8Q9H579 483 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 PTGFRNQ9P2B2 879 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 FBXO4Q9UKT5 387 aa6.68□□□□□ -1.34
NPAS3-204ENST00000546849 A0A1B0GVC2 190 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 A6NLC8 198 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 SKIV2L2P42285 1042 aaKnown RBP6.67□□□□□ -1.34
NPAS3-204ENST00000546849 ARHGAP25P42331 645 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 CCR5P51681 352 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 AP5B1Q2VPB7 878 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
NPAS3-204ENST00000546849 ZNF793Q6ZN11 406 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 RNF144BQ7Z419 303 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 PRIMA1Q86XR5 153 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 GALNT16Q8N428 558 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 PAQR4Q8N4S7 273 aaPredicted RBP6.67□□□□□ -1.34
NPAS3-204ENST00000546849 ZNF398Q8TD17 642 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 RNFT2Q96EX2 444 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 NPLQ9BXD5 320 aaPredicted RBP6.67□□□□□ -1.34
NPAS3-204ENST00000546849 CTDSP1Q9GZU7 261 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 ZHX3Q9H4I2 956 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 UBN1Q9NPG3 1134 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 NRIP3Q9NQ35 241 aa6.67□□□□□ -1.34
NPAS3-204ENST00000546849 TMEM160Q9NX00 188 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms